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父亲年龄增加与一般人群中基因组拷贝数变异负担的影响。

Increased paternal age and the influence on burden of genomic copy number variation in the general population.

机构信息

Department of Psychiatry, Rudolf Magnus Institute of Neuroscience, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX Utrecht, The Netherlands.

出版信息

Hum Genet. 2013 Apr;132(4):443-50. doi: 10.1007/s00439-012-1261-4. Epub 2013 Jan 13.

DOI:10.1007/s00439-012-1261-4
PMID:23315237
Abstract

Genomic copy number variations (CNVs) and increased parental age are both associated with the risk to develop a variety of clinical neuropsychiatric disorders such as autism, schizophrenia and bipolar disorder. At the same time, it has been shown that the rate of transmitted de novo single nucleotide mutations is increased with paternal age. To address whether paternal age also affects the burden of structural genomic deletions and duplications, we examined various types of CNV burden in a large population sample from the Netherlands. Healthy participants with parental age information (n = 6,773) were collected at different University Medical Centers. CNVs were called with the PennCNV algorithm using Illumina genome-wide SNP array data. We observed no evidence in support of a paternal age effect on CNV load in the offspring. Our results were negative for global measures as well as several proxies for de novo CNV events in this unique sample. While recent studies suggest de novo single nucleotide mutation rate to be dominated by the age of the father at conception, our results strongly suggest that at the level of global CNV burden there is no influence of increased paternal age. While it remains possible that local genomic effects may exist for specific phenotypes, this study indicates that global CNV burden and increased father's age may be independent disease risk factors.

摘要

基因组拷贝数变异(CNVs)和父母年龄的增加都与多种临床神经精神疾病的风险相关,如自闭症、精神分裂症和双相情感障碍。与此同时,已经表明,随着父亲年龄的增加,新发生的单核苷酸突变的传递率也会增加。为了确定父亲的年龄是否也会影响结构基因组缺失和重复的负担,我们在荷兰的一个大型人群样本中检查了各种类型的 CNV 负担。在不同的大学医学中心收集了有父母年龄信息的健康参与者(n=6773)。使用 PennCNV 算法和 Illumina 全基因组 SNP 芯片数据对 CNVs 进行了调用。我们没有发现支持父亲年龄对后代 CNV 负荷有影响的证据。我们的结果对该独特样本中的全局测量以及几个新发生 CNV 事件的替代指标均为阴性。虽然最近的研究表明,新发生的单核苷酸突变率主要由受孕时父亲的年龄决定,但我们的结果强烈表明,在全球 CNV 负担水平上,增加的父亲年龄没有影响。虽然对于特定表型可能存在局部基因组效应,但这项研究表明,全球 CNV 负担和增加的父亲年龄可能是独立的疾病风险因素。

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