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通过衰减全反射傅里叶变换红外光谱法监测三聚体甜菜碱转运蛋白BetP中钾离子诱导的构象变化。

K(+)-induced conformational changes in the trimeric betaine transporter BetP monitored by ATR-FTIR spectroscopy.

作者信息

Korkmaz Filiz, Ressl Susanne, Ziegler Christine, Mäntele Werner

机构信息

Institute for Biophysics, Goethe-University, Max-von-Laue Str.1 D-60438, Frankfurt am Main, Germany.

出版信息

Biochim Biophys Acta. 2013 Apr;1828(4):1181-91. doi: 10.1016/j.bbamem.2013.01.004. Epub 2013 Jan 11.

DOI:10.1016/j.bbamem.2013.01.004
PMID:23318153
Abstract

The trimeric Na(+)-coupled betaine symporter BetP from Corynebactrium glutamicum adjusts transport activity according to the external osmolality. BetP senses the increasing internal K(+) concentration, which is an immediate consequence of osmotic upshift in C. glutamicum. It is assumed that BetP specifically binds potassium to yet unidentified binding sites, thereby inducing conformational changes resulting in activation. Atomic structures of BetP were obtained in the absence of potassium allowing only a speculative glimpse on a putative mechanism of K(+)-induced transport activation. The structural data suggest that activation in BetP is crucially linked to its trimeric state involving an interaction network between several arginines and glutamates and aspartates. Here, we describe the effect of K(+)-induced activation on the specific ionic interaction sites in terminal domains and loops and on the protomer-protomer interactions within the trimer studied by ATR-FTIR spectroscopy. We suggest that arginine and aspartate and/or glutamate residues at the trimeric interface rearrange upon K(+)-induced activation, although they remain assembled in an interaction network. Our data propose a two-step mechanism comprising first a change in solvent exposure of charged residues and second a modification of their interaction sites in a partner-switching manner. FTIR reveals a higher α-helical content than expected from the X-ray structures that we attribute to the structurally unresolved N-terminal domain modulating regulation. In situ (1)H/(2)H exchange studies point toward an altered exposure of backbone regions to buffer solution upon activation, most likely due to conformational changes in both terminal domains, which further affects ionic interactions within the trimer.

摘要

来自谷氨酸棒杆菌的三聚体Na⁺偶联甜菜碱同向转运蛋白BetP根据外部渗透压调节转运活性。BetP感知细胞内K⁺浓度的增加,这是谷氨酸棒杆菌渗透压升高的直接结果。据推测,BetP特异性地将钾结合到尚未确定的结合位点,从而诱导构象变化导致激活。在没有钾的情况下获得了BetP的原子结构,这仅能让我们推测钾诱导转运激活的可能机制。结构数据表明,BetP的激活与其三聚体状态密切相关,涉及几个精氨酸与谷氨酸和天冬氨酸之间的相互作用网络。在此,我们描述了钾诱导激活对末端结构域和环中的特定离子相互作用位点以及三聚体内原聚体 - 原聚体相互作用的影响,这些是通过衰减全反射傅里叶变换红外光谱(ATR - FTIR)研究的。我们认为,三聚体界面处的精氨酸和天冬氨酸和/或谷氨酸残基在钾诱导激活时会重新排列,尽管它们仍组装在一个相互作用网络中。我们的数据提出了一个两步机制,首先是带电残基的溶剂暴露发生变化,其次是以伴侣切换的方式改变它们的相互作用位点。傅里叶变换红外光谱显示α - 螺旋含量高于X射线结构预期的含量,我们将其归因于结构未解析的N末端结构域对调节的影响。原位¹H/²H交换研究表明,激活后主链区域与缓冲溶液的暴露发生了改变,这很可能是由于两个末端结构域的构象变化,进而影响了三聚体内的离子相互作用。

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