Işeri E İ, Albayrak D, Gülen D
Physics Department, Middle East Technical University, 06531 Ankara, Turkey.
J Biol Phys. 2000 Dec;26(4):321-39. doi: 10.1023/A:1010352731838.
We have suggested a model for the electronic excited states of the minorplant antenna, CP29, by incorporating a considerable part of the currentinformation offered by structure determination, site-directed mutagenesis,and spectroscopy in the modeling.We have assumed that the electronic excited states of the complex havebeen decided by the chlorophyll-chlorophyll (Chl) and Chl-proteininteractions and have modeled the Coulombic interaction between a pairof Chls in the point-dipole approximation and the Chl-protein interactionsare treated as empirical fit parameters.We have suggested the Q(y) dipole moment orientations and the siteenergies for all the chlorophylls in the complex through a simultaneoussimulation of the absorption and linear dichroism spectra.The assignments proposed have been discussed to yield a satisfactoryreproduction of all prominent features of the absorption, linear and circulardichroism spectra as well as the key spectral and temporal characteristics ofthe energy transfer processes among the chlorophylls.The orientations and the spectral assignments obtained by relatively simpleexciton calculations have been necessary to provide a good point ofdeparture for more detailed treatments of structure-function relationship inCP29. Moreover, it has been discussed that the CP29 model suggested canguide the studies for a better understanding of the structure-functionrelationship in the major plant antenna, LHCII.
我们通过在建模中纳入结构测定、定点诱变和光谱学提供的大量现有信息,提出了一种关于小型植物天线CP29电子激发态的模型。我们假定该复合物的电子激发态由叶绿素-叶绿素(Chl)和Chl-蛋白质相互作用决定,并在点偶极近似中对一对Chl之间的库仑相互作用进行了建模,而Chl-蛋白质相互作用则被视为经验拟合参数。我们通过同时模拟吸收光谱和线性二色性光谱,给出了复合物中所有叶绿素的Q(y)偶极矩方向和位点能量。所提出的归属已得到讨论,以实现对吸收光谱、线性和圆二色性光谱的所有显著特征以及叶绿素间能量转移过程的关键光谱和时间特征的令人满意的再现。通过相对简单的激子计算获得的方向和光谱归属,对于更详细地处理CP29中的结构-功能关系而言,是提供良好出发点所必需的。此外,已经讨论过,所提出的CP29模型可以指导相关研究,以便更好地理解大型植物天线LHCII中的结构-功能关系。