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指示潘尼孢菌,一种来自冰川的嗜冷细菌,以及将南极芽孢八叠球菌重新分类为南极潘尼孢菌复合种。 nov. 并修订了潘尼孢菌属的描述。

Paenisporosarcina indica sp. nov., a psychrophilic bacterium from a glacier, and reclassification of Sporosarcina antarctica Yu et al., 2008 as Paenisporosarcina antarctica comb. nov. and emended description of the genus Paenisporosarcina.

机构信息

Centre for Cellular and Molecular Biology Uppal Road, Hyderabad 500 007, India.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2927-2933. doi: 10.1099/ijs.0.047514-0. Epub 2013 Jan 25.

Abstract

A Gram-stain-positive, aerobic, spore-forming, rod-shaped bacterium, PN2(T), was isolated from a soil sample collected near the Pindari glacier. It contained anteiso-C15 : 0, iso-C15 : 0 and C16 : 1ω7c alcohol as the predominant fatty acids, MK-7 as the major menaquinone and A4α type (l-Lys-d-Glu) peptidoglycan. Based on these characteristics, strain PN2(T) was assigned to the genus Paenisporosarcina. Phylogenetic analysis based on 16S rRNA gene sequence placed strain PN2(T) within the genus Paenisporosarcina and showed a sequence similarity of 98.5-99.0 % with members of this genus. Paenisporosarcina macmurdoensis CMS 21w(T), Paenisporosarcina quisquiliarum SK 55(T) and Sporosarcina antarctica N-05(T) were identified as the most closely related species with 16S rRNA gene sequence similarities of 98.6 %, 99.0 % and 98.4 %, respectively. The values for DNA-DNA relatedness between strain PN2(T) and P. macmurdoensis, P. quisquiliarum and S. antarctica were below the 70 % threshold value (32.0 %, 42.0 % and 38.0 % respectively). In addition, strain PN2(T) exhibited a number of phenotypic differences from P. macmurdoensis, P. quisquiliarum and S. antarctica. Based on the cumulative differences, strain PN2(T) was identified as representing a novel species and the name Paenisporosarcina indica sp. nov. was proposed. The type strain of Paenisporosarcina indica sp. nov. is PN2(T) (LMG 23933(T) = JCM 15114(T)). Furthermore, based on the morphological and chemotaxonomic characteristics, the species Sporosarcina antarctica was reclassified as a species of the genus Paenisporosarcina and renamed Paenisporosarcina antarctica comb. nov. In addition, an emended description of the genus Paenisporosarcina is presented.

摘要

一株革兰氏阳性、需氧、产芽孢的杆菌,PN2(T),从 Pindari 冰川附近采集的土壤样本中分离得到。它含有 anteiso-C15 : 0、iso-C15 : 0 和 C16 : 1ω7c 醇作为主要脂肪酸,MK-7 作为主要的menaquinone 和 A4α 型(l-Lys-d-Glu)肽聚糖。基于这些特征,菌株 PN2(T)被分配到 Paenisporosarcina 属。基于 16S rRNA 基因序列的系统发育分析将菌株 PN2(T)置于 Paenisporosarcina 属内,与该属的成员具有 98.5-99.0%的序列相似性。Paenisporosarcina macmurdoensis CMS 21w(T)、Paenisporosarcina quisquiliarum SK 55(T)和 Sporosarcina antarctica N-05(T)被鉴定为与 16S rRNA 基因序列相似度分别为 98.6%、99.0%和 98.4%的最密切相关的物种。菌株 PN2(T)与 P. macmurdoensis、P. quisquiliarum 和 S. antarctica 之间的 DNA-DNA 相关值低于 70%的阈值(分别为 32.0%、42.0%和 38.0%)。此外,菌株 PN2(T)表现出与 P. macmurdoensis、P. quisquiliarum 和 S. antarctica 的许多表型差异。基于累积差异,菌株 PN2(T)被鉴定为代表一个新物种,并提出了 Paenisporosarcina indica sp. nov.的名称。Paenisporosarcina indica sp. nov.的模式菌株为 PN2(T)(LMG 23933(T)=JCM 15114(T))。此外,基于形态学和化学分类学特征,将 Sporosarcina antarctica 重新分类为 Paenisporosarcina 属的一个种,并更名为 Paenisporosarcina antarctica comb. nov.。此外,还提出了 Paenisporosarcina 属的修订描述。

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