Suppr超能文献

驱动致癌作用的磷酸化酪氨酸信号蛋白往往高度相互关联。

Phosphotyrosine signaling proteins that drive oncogenesis tend to be highly interconnected.

机构信息

Department of Systems Biology, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Mol Cell Proteomics. 2013 May;12(5):1204-13. doi: 10.1074/mcp.M112.025858. Epub 2013 Jan 28.

Abstract

Mutation and overexpression of receptor tyrosine kinases or the proteins they regulate serve as oncogenic drivers in diverse cancers. To better understand receptor tyrosine kinase signaling and its link to oncogenesis, we used protein microarrays to systematically and quantitatively measure interactions between virtually every SH2 or PTB domain encoded in the human genome and all known sites of tyrosine phosphorylation on 40 receptor tyrosine kinases and on most of the SH2 and PTB domain-containing adaptor proteins. We found that adaptor proteins, like RTKs, have many high affinity bindings sites for other adaptor proteins. In addition, proteins that drive cancer, including both receptors and adaptor proteins, tend to be much more highly interconnected via networks of SH2 and PTB domain-mediated interactions than nononcogenic proteins. Our results suggest that network topological properties such as connectivity can be used to prioritize new drug targets in this well-studied family of signaling proteins.

摘要

受体酪氨酸激酶或其调控蛋白的突变和过表达在多种癌症中充当致癌驱动因素。为了更好地理解受体酪氨酸激酶信号及其与致癌作用的关系,我们使用蛋白质微阵列系统地和定量地测量了人类基因组中编码的几乎每个 SH2 或 PTB 结构域与 40 个受体酪氨酸激酶上所有已知酪氨酸磷酸化位点以及大多数含有 SH2 和 PTB 结构域的衔接蛋白上的酪氨酸磷酸化位点之间的相互作用。我们发现,衔接蛋白与 RTKs 一样,具有许多高亲和力的结合位点,可与其他衔接蛋白结合。此外,驱动癌症的蛋白质,包括受体和衔接蛋白,通过 SH2 和 PTB 结构域介导的相互作用形成的网络,比非致癌蛋白的相互作用更加紧密。我们的结果表明,网络拓扑性质(如连通性)可用于优先考虑这个研究充分的信号蛋白家族中的新药物靶点。

相似文献

1
Phosphotyrosine signaling proteins that drive oncogenesis tend to be highly interconnected.
Mol Cell Proteomics. 2013 May;12(5):1204-13. doi: 10.1074/mcp.M112.025858. Epub 2013 Jan 28.
3
Molecular mechanisms of SH2- and PTB-domain-containing proteins in receptor tyrosine kinase signaling.
Cold Spring Harb Perspect Biol. 2013 Dec 1;5(12):a008987. doi: 10.1101/cshperspect.a008987.
4
SH2 and PTB domain interactions in tyrosine kinase signal transduction.
Curr Opin Chem Biol. 1997 Aug;1(2):227-34. doi: 10.1016/s1367-5931(97)80014-2.
7
Direct Phosphorylation of SRC Homology 3 Domains by Tyrosine Kinase Receptors Disassembles Ligand-Induced Signaling Networks.
Mol Cell. 2018 Jun 21;70(6):995-1007.e11. doi: 10.1016/j.molcel.2018.05.013. Epub 2018 Jun 18.
8
Pinpointing phosphotyrosine-dependent interactions downstream of the collagen receptor DDR1.
FEBS Lett. 2006 Jan 9;580(1):15-22. doi: 10.1016/j.febslet.2005.11.035. Epub 2005 Dec 1.
9
Regulation and targets of receptor tyrosine kinases.
Eur J Cancer. 2002 Sep;38 Suppl 5:S3-10. doi: 10.1016/s0959-8049(02)80597-4.

引用本文的文献

1
Deciphering the role of ferroptosis in rheumatoid arthritis: Synovial transcriptome analysis and immune infiltration correlation.
Heliyon. 2024 Jun 26;10(13):e33648. doi: 10.1016/j.heliyon.2024.e33648. eCollection 2024 Jul 15.
3
Comprehensive immunohistochemical analysis of RET, BCAR1, and BCAR3 expression in patients with Luminal A and B breast cancer subtypes.
Breast Cancer Res Treat. 2022 Feb;192(1):43-52. doi: 10.1007/s10549-021-06452-9. Epub 2022 Jan 15.
4
New analysis pipeline for high-throughput domain-peptide affinity experiments improves SH2 interaction data.
J Biol Chem. 2020 Aug 7;295(32):11346-11363. doi: 10.1074/jbc.RA120.012503. Epub 2020 Jun 15.
5
The SH3 domains of the protein kinases ITK and LCK compete for adjacent sites on T cell-specific adapter protein.
J Biol Chem. 2019 Oct 18;294(42):15480-15494. doi: 10.1074/jbc.RA119.008318. Epub 2019 Sep 4.
6
Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor.
PLoS Comput Biol. 2019 Jan 17;15(1):e1006706. doi: 10.1371/journal.pcbi.1006706. eCollection 2019 Jan.
8
Large-Scale Phosphoproteomics Reveals Shp-2 Phosphatase-Dependent Regulators of Pdgf Receptor Signaling.
Cell Rep. 2018 Mar 6;22(10):2784-2796. doi: 10.1016/j.celrep.2018.02.038.
9
10
Novel genetic risk variants for pediatric celiac disease.
Hum Genomics. 2016 Oct 24;10(1):34. doi: 10.1186/s40246-016-0091-1.

本文引用的文献

1
Comprehensive molecular characterization of human colon and rectal cancer.
Nature. 2012 Jul 18;487(7407):330-7. doi: 10.1038/nature11252.
2
Vandetanib for the treatment of metastatic medullary thyroid cancer.
Clin Med Insights Oncol. 2012;6:243-52. doi: 10.4137/CMO.S7999. Epub 2012 Jun 7.
4
Deep proteome and transcriptome mapping of a human cancer cell line.
Mol Syst Biol. 2011 Nov 8;7:548. doi: 10.1038/msb.2011.81.
6
Rapid phospho-turnover by receptor tyrosine kinases impacts downstream signaling and drug binding.
Mol Cell. 2011 Sep 2;43(5):723-37. doi: 10.1016/j.molcel.2011.07.014.
7
Controllability of complex networks.
Nature. 2011 May 12;473(7346):167-73. doi: 10.1038/nature10011.
9
A Conserved residue in the yeast Bem1p SH3 domain maintains the high level of binding specificity required for function.
J Biol Chem. 2011 Jun 3;286(22):19470-7. doi: 10.1074/jbc.M111.229294. Epub 2011 Apr 12.
10
Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy.
Nucleic Acids Res. 2011 Jul;39(Web Server issue):W475-8. doi: 10.1093/nar/gkr201. Epub 2011 Apr 5.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验