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自动病毒粒子选择——熵方法。

Automatic virus particle selection--the entropy approach.

机构信息

Faculty of Sciences, University of Lisbon, Lisboa, Portugal.

出版信息

IEEE Trans Image Process. 2013 May;22(5):1996-2003. doi: 10.1109/TIP.2013.2244216. Epub 2013 Feb 1.

Abstract

This paper describes a fully automatic approach to locate icosahedral virus particles in transmission electron microscopy images. The initial detection of the particles takes place through automatic segmentation of the entropy-proportion image; this image is computed in particular regions of interest defined by two concentric structuring elements contained in a small overlapping window running over all the image. Morphological features help to select the candidates, as the threshold is kept low enough to avoid false negatives. The candidate points are subject to a credibility test based on features extracted from eight radial intensity profiles in each point from a texture image. A candidate is accepted if these features meet the set of acceptance conditions describing the typical intensity profiles of these kinds of particles. The set of points accepted is subjected to a last validation in a three-parameter space using a discrimination plan that is a function of the input image to separate possible outliers.

摘要

本文描述了一种在透射电子显微镜图像中自动定位二十面体病毒颗粒的方法。通过自动分割熵比图像进行初始检测;该图像是在一个小重叠窗口中运行的两个同心结构元素定义的特定感兴趣区域计算得出的,该窗口覆盖了所有图像。形态特征有助于选择候选对象,因为阈值保持足够低以避免假阴性。候选点要经过基于从纹理图像中每个点的八个径向强度轮廓中提取的特征的可信度测试。如果这些特征满足描述此类粒子典型强度轮廓的一组可接受条件,则接受候选点。所接受的点集在使用判别图的三参数空间中进行最后验证,判别图是输入图像的函数,用于分离可能的异常值。

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