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濒危黄肩亚马逊鹦鹉(Amazona barbadensis)的完整线粒体基因组:亚马逊鹦鹉属鹦鹉物种中的两个控制区拷贝

Complete mitochondrial genome of endangered Yellow-shouldered Amazon (Amazona barbadensis): two control region copies in parrot species of the Amazona genus.

作者信息

Urantowka Adam Dawid, Hajduk Kacper, Kosowska Barbara

机构信息

Department of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, Wroclaw 51–631, Poland.

出版信息

Mitochondrial DNA. 2013 Aug;24(4):411-3. doi: 10.3109/19401736.2013.766177. Epub 2013 Feb 13.

Abstract

Amazona barbadensis is an endangered species of parrot living in northern coastal Venezuela and in several Caribbean islands. In this study, we sequenced full mitochondrial genome of the considered species. The total length of the mitogenome was 18,983 bp and contained 13 protein-coding genes, 22 transfer RNA genes, two ribosomal RNA genes, duplicated control region, and degenerate copies of ND6 and tRNA (Glu) genes. High degree of identity between two copies of control region suggests their coincident evolution and functionality. Comparative analysis of both the control region sequences from four Amazona species revealed their 89.1% identity over a region of 1300 bp and indicates the presence of distinctive parts of two control region copies.

摘要

巴巴多斯亚马逊鹦鹉是一种濒危鹦鹉物种,生活在委内瑞拉北部沿海地区和几个加勒比岛屿。在本研究中,我们对该物种的完整线粒体基因组进行了测序。线粒体基因组全长18983 bp,包含13个蛋白质编码基因、22个转运RNA基因、两个核糖体RNA基因、重复的控制区以及ND6和tRNA(Glu)基因的退化拷贝。控制区两个拷贝之间的高度同一性表明它们的协同进化和功能。对四种亚马逊鹦鹉物种的控制区序列进行比较分析,发现在1300 bp的区域内它们的同一性为89.1%,这表明存在两个控制区拷贝的独特部分。

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