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水疱性口炎病毒中适应性和遗传稳健性的一致进化。

Congruent evolution of fitness and genetic robustness in vesicular stomatitis virus.

机构信息

Department of Medical Microbiology and Immunology, College of Medicine, University of Toledo Health Science Campus, Toledo, Ohio, USA.

出版信息

J Virol. 2013 May;87(9):4923-8. doi: 10.1128/JVI.02796-12. Epub 2013 Feb 13.

Abstract

Quasispecies theory is a case of mutation-selection balance for evolution at high mutation rates, such as those observed in RNA viruses. One of the main predictions of this model is the selection for robustness, defined as the ability of an organism to remain phenotypically unchanged in the face of mutation. We have used a collection of vesicular stomatitis virus strains that had been evolving either under positive selection or under random drift. We had previously shown that the former increase in fitness while the latter have overall fitness decreases (I. S. Novella, J. B. Presloid, T. Zhou, S. D. Smith-Tsurkan, B. E. Ebendick-Corpus, R. N. Dutta, K. L. Lust, and C. O. Wilke, J. Virol. 84:4960-4968, 2010). Here, we determined the robustness of these strains and demonstrated that strains under positive selection not only increase in fitness but also increase in robustness. In contrast, strains under drift not only decreased in fitness but also decreased in robustness. There was a good overall correlation between fitness and robustness. We also tested whether there was a correlation between fitness and thermostability, and we observed that the correlation was imperfect, indicating that the fitness effects of mutations are exerted in part at a level other than changing the resistance of the protein to temperature.

摘要

准种理论是一种在高突变率下进化的突变-选择平衡的情况,如在 RNA 病毒中观察到的那样。该模型的主要预测之一是对稳健性的选择,稳健性定义为生物体在面对突变时保持表型不变的能力。我们使用了一组已经在正选择或随机漂变下进化的水疱性口炎病毒株。我们之前已经表明,前者的适应性增加,而后者的适应性总体下降(I.S. Novella、J.B. Presloid、T. Zhou、S.D. Smith-Tsurkan、B.E. Ebendick-Corpus、R.N. Dutta、K.L. Lust 和 C.O. Wilke,J. Virol. 84:4960-4968, 2010)。在这里,我们确定了这些菌株的稳健性,并证明了在正选择下的菌株不仅适应性增加,而且稳健性也增加。相比之下,在漂变下的菌株不仅适应性下降,而且稳健性也下降。适应性和稳健性之间存在很好的总体相关性。我们还测试了适应性和热稳定性之间是否存在相关性,我们观察到相关性并不完美,表明突变的适应性效应部分是在改变蛋白质对温度的抗性之外的水平上发挥的。

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