Durand M, Maurizot J C, Borazan H N, Hélène C
Biochemistry. 1975 Feb 11;14(3):563-70. doi: 10.1021/bi00674a016.
The binding of peptides containing lysyl and aromatic residues to poly(A) in its single-stranded form at pH 7 leads to a change of its circular dichroism (CD) spectrum, which is mainly due to the stacking of the aromatic amino acid with the bases of poly(A). Comparison is made between the binding of peptides having different primary structures which gives indications on the way the peptides bind to poly(A). A method is described which allows the calculation of the binding parameters from CD data. The magnitude of the association constant depends on the size of the aromatic ring and decreases in the order tryptophan greater than tyrosine greater than phenylalanine. The CD amplitude decreases linearly with the concentration of bound molecules. These results are discussed with respect to the role played by aromatic amino acids in complex formation between nucleic acids and proteins.
在pH 7条件下,含有赖氨酰基和芳香族残基的肽与单链形式的聚腺苷酸(poly(A))结合会导致其圆二色性(CD)光谱发生变化,这主要是由于芳香族氨基酸与聚腺苷酸的碱基发生了堆积。对具有不同一级结构的肽的结合情况进行了比较,这为肽与聚腺苷酸的结合方式提供了线索。描述了一种从CD数据计算结合参数的方法。缔合常数的大小取决于芳香环的大小,其递减顺序为色氨酸大于酪氨酸大于苯丙氨酸。CD振幅随结合分子浓度呈线性下降。结合核酸与蛋白质之间复合物形成过程中芳香族氨基酸所起的作用,对这些结果进行了讨论。