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核孔蛋白 Nup170p 在染色质结构和基因沉默中的作用。

A role for the nucleoporin Nup170p in chromatin structure and gene silencing.

机构信息

Department of Cell Biology, University of Alberta, Edmonton, Alberta T6G 2H7, Canada.

出版信息

Cell. 2013 Feb 28;152(5):969-83. doi: 10.1016/j.cell.2013.01.049.

DOI:10.1016/j.cell.2013.01.049
PMID:23452847
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3690833/
Abstract

Embedded in the nuclear envelope, nuclear pore complexes (NPCs) not only regulate nuclear transport but also interface with transcriptionally active euchromatin, largely silenced heterochromatin, as well as the boundaries between these regions. It is unclear what functional role NPCs play in establishing or maintaining these distinct chromatin domains. We report that the yeast NPC protein Nup170p interacts with regions of the genome that contain ribosomal protein and subtelomeric genes, where it functions in nucleosome positioning and as a repressor of transcription. We show that the role of Nup170p in subtelomeric gene silencing is linked to its association with the RSC chromatin-remodeling complex and the silencing factor Sir4p, and that the binding of Nup170p and Sir4p to subtelomeric chromatin is cooperative and necessary for the association of telomeres with the nuclear envelope. Our results establish the NPC as an active participant in silencing and the formation of peripheral heterochromatin.

摘要

嵌入核膜中的核孔复合体(NPCs)不仅调节核运输,还与转录活跃的常染色质、大部分沉默的异染色质以及这些区域之间的边界相互作用。目前尚不清楚 NPC 在建立或维持这些不同染色质区域方面发挥什么功能作用。我们报告称,酵母 NPC 蛋白 Nup170p 与基因组中包含核糖体蛋白和端粒基因的区域相互作用,在核小体定位和转录抑制中发挥作用。我们表明,Nup170p 在端粒基因沉默中的作用与其与 RSC 染色质重塑复合物和沉默因子 Sir4p 的关联有关,并且 Nup170p 和 Sir4p 与端粒外染色质的结合是协同的,并且对于端粒与核膜的关联是必需的。我们的结果确立了 NPC 作为沉默和形成外围异染色质的积极参与者。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/b5b120983646/nihms459309f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/7d532f5e66ca/nihms459309f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/5acefc723ce3/nihms459309f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/03d1db5afce0/nihms459309f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/cdd7ca7ad8ad/nihms459309f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/08322bce9276/nihms459309f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/91396b634c4e/nihms459309f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/b5b120983646/nihms459309f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/7d532f5e66ca/nihms459309f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/5acefc723ce3/nihms459309f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/03d1db5afce0/nihms459309f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/cdd7ca7ad8ad/nihms459309f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/08322bce9276/nihms459309f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/91396b634c4e/nihms459309f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/df9d/3690833/b5b120983646/nihms459309f7.jpg

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本文引用的文献

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2
The yeast nuclear pore complex and transport through it.酵母核孔复合体及其转运。
Genetics. 2012 Mar;190(3):855-83. doi: 10.1534/genetics.111.127803.
3
Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile.利用真核嗜热生物的基因组深入了解核孔复合体的结构与组装。
染色质内源切割提供了酵母RNA聚合酶II转录动力学的全局视图。
bioRxiv. 2024 Oct 10:2024.07.08.602535. doi: 10.1101/2024.07.08.602535.
4
DeleteomeTools: Utilizing a compendium of yeast deletion strain transcriptomes to identify co-functional genes.缺失基因组工具:利用酵母缺失菌株转录组汇编来鉴定共功能基因。
bioRxiv. 2025 Jan 13:2024.02.05.578946. doi: 10.1101/2024.02.05.578946.
5
Nuclear transport proteins: structure, function, and disease relevance.核转运蛋白:结构、功能与疾病相关性
Signal Transduct Target Ther. 2023 Nov 10;8(1):425. doi: 10.1038/s41392-023-01649-4.
6
A R-loop sensing pathway mediates the relocation of transcribed genes to nuclear pore complexes.R 环感应途径介导转录基因向核孔复合体的重定位。
Nat Commun. 2023 Sep 20;14(1):5606. doi: 10.1038/s41467-023-41345-z.
7
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