• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

改进隐滴虫鉴定方法:结合光学显微镜和 PCR 扩增。

Improved methodology for identification of cryptomonads: combining light microscopy and PCR amplification.

机构信息

Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, China.

出版信息

J Microbiol Biotechnol. 2013 Mar;23(3):289-96. doi: 10.4014/jmb.1203.03057.

DOI:10.4014/jmb.1203.03057
PMID:23462000
Abstract

Cryptomonads are unicellular, biflagellate algae. Generally, cryptomonad cells cannot be preserved well because of their fragile nature, and an improved methodology should be developed to identify cryptomonads from natural habitats. In this study, we tried using several cytological fixatives, including glutaraldehyde, formaldehyde, and their combinations to preserve field samples collected from various waters, and the currently used fixative, Lugol's solution was tested for comparison. Results showed that among the fixatives tested, glutaraldehyde preserved the samples best, and the optimal concentration of glutaraldehyde was 2%. The cell morphology was well preserved by glutaraldehyde. Cells kept their original color, volume, and shape, and important taxonomic features such as furrow/gullet complex, ejectosomes, as well as flagella could be observed clearly, whereas these organelles frequently disappeared in Lugol's solution preserved samples. The osmotic adjustments and buffers tested could not preserve cell density significantly higher. Statistical calculation showed the cell density in the samples preserved by 2% glutaraldehyde remained stable after 43 days of the fixation procedure. In addition, DNA was extracted from glutaraldehyde preserved samples by grinding with liquid nitrogen and the 18S rDNA sequence was amplified by PCR. The sequence was virtually identical to the reference sequence, and phylogenetic analyses showed very close relationship between it and sequences from the same organism. To sum up, the present study demonstrated that 2% unbuffered glutaraldehyde, without osmotic adjustments, can preserve cryptomonads cells for identification, in terms of both light microscopy and phylogenetic analyses based on DNA sequences.

摘要

隐藻是单细胞、双鞭毛藻类。通常,由于隐藻的脆弱性质,它们的细胞不能很好地保存,因此应该开发一种改进的方法来从自然栖息地中鉴定隐藻。在这项研究中,我们尝试使用几种细胞学固定剂,包括戊二醛、甲醛及其组合,来保存从各种水域采集的现场样本,并测试了目前使用的固定剂卢戈氏液进行比较。结果表明,在所测试的固定剂中,戊二醛对样本的保存效果最好,最佳戊二醛浓度为 2%。戊二醛很好地保存了细胞形态。细胞保持其原始颜色、体积和形状,并且可以清楚地观察到重要的分类特征,如沟/咽复合体、喷出体以及鞭毛,而这些细胞器在卢戈氏液保存的样本中经常消失。测试的渗透压调节剂和缓冲液不能显著提高细胞密度。统计计算表明,在固定程序 43 天后,用 2%戊二醛保存的样本中的细胞密度保持稳定。此外,通过用液氮研磨从戊二醛保存的样本中提取 DNA,并通过 PCR 扩增 18S rDNA 序列。该序列与参考序列几乎完全相同,系统发育分析表明其与同一生物的序列非常接近。总之,本研究表明,2%无缓冲戊二醛无需渗透压调节即可保存隐藻细胞,可用于光镜和基于 DNA 序列的系统发育分析鉴定。

相似文献

1
Improved methodology for identification of cryptomonads: combining light microscopy and PCR amplification.改进隐滴虫鉴定方法:结合光学显微镜和 PCR 扩增。
J Microbiol Biotechnol. 2013 Mar;23(3):289-96. doi: 10.4014/jmb.1203.03057.
2
Improved methodology for identification of protists and microalgae from plankton samples preserved in Lugol's iodine solution: combining microscopic analysis with single-cell PCR.改进的从保存在卢戈氏碘液中的浮游生物样本中鉴定原生生物和微藻的方法:将显微镜分析与单细胞PCR相结合。
Appl Environ Microbiol. 2008 Apr;74(8):2505-10. doi: 10.1128/AEM.01803-07. Epub 2008 Feb 22.
3
Ultrastructure and molecular phylogeny of the cryptomonad Goniomonas avonlea sp. nov.隐甲藻属新种阿冯利隐甲藻的超微结构和分子系统发育
Protist. 2013 Mar;164(2):160-82. doi: 10.1016/j.protis.2012.10.002. Epub 2012 Nov 3.
4
Diversification of unicellular eukaryotes: cryptomonad colonizations of marine and fresh waters inferred from revised 18S rRNA phylogeny.单细胞真核生物的多样化:基于修订后的18S rRNA系统发育推断海洋和淡水环境中的隐滴虫定殖情况
Environ Microbiol. 2008 Oct;10(10):2635-44. doi: 10.1111/j.1462-2920.2008.01685.x. Epub 2008 Jul 16.
5
The katablepharids are a distant sister group of the Cryptophyta: A proposal for Katablepharidophyta divisio nova/ Kathablepharida phylum novum based on SSU rDNA and beta-tubulin phylogeny.卡塔莱弗藻纲是隐藻门的一个远缘姐妹类群:基于小亚基核糖体DNA和β-微管蛋白系统发育对新的卡塔莱弗藻门/新的卡塔莱弗藻纲的提议。
Protist. 2005 Aug;156(2):163-79. doi: 10.1016/j.protis.2004.12.003.
6
Combining molecular data with classical morphology for uncultured phagotrophic euglenids (Excavata): a single-cell approach.将分子数据与未培养的吞噬性裸藻(领鞭毛目)的经典形态学相结合:单细胞方法。
J Eukaryot Microbiol. 2013 Nov-Dec;60(6):615-25. doi: 10.1111/jeu.12068. Epub 2013 Jul 24.
7
Ultrastructure and phylogenetic placement within Heterolobosea of the previously unclassified, extremely halophilic heterotrophic flagellate Pleurostomum flabellatum (Ruinen 1938).先前未分类的、极端嗜盐的异养鞭毛虫扇形侧口虫(鲁伊嫩,1938年)在异叶足虫纲中的超微结构及系统发育位置。
Protist. 2007 Jul;158(3):397-413. doi: 10.1016/j.protis.2007.03.004. Epub 2007 Jun 18.
8
Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Insight into the diversity and evolution of the cryptomonad nucleomorph genome.2005年SMBE三国青年研究者研讨会会议记录。对隐滴虫核质体基因组的多样性和进化的洞察。
Mol Biol Evol. 2006 May;23(5):856-65. doi: 10.1093/molbev/msj066. Epub 2005 Nov 23.
9
DNA barcoding identifies Eimeria species and contributes to the phylogenetics of coccidian parasites (Eimeriorina, Apicomplexa, Alveolata).DNA 条形码鉴定艾美耳球虫种,并有助于球虫寄生虫(艾美耳球虫亚目、顶复门、质体)的系统发生学研究。
Int J Parasitol. 2011 Jul;41(8):843-50. doi: 10.1016/j.ijpara.2011.03.007. Epub 2011 Apr 7.
10
Description of a new planktonic mixotrophic dinoflagellate Paragymnodinium shiwhaense n. gen., n. sp. from the coastal waters off Western Korea: morphology, pigments, and ribosomal DNA gene sequence.描述一种来自朝鲜西部沿海的新的浮游混合营养性甲藻 Paragymnodinium shiwhaense n. gen., n. sp.:形态、色素和核糖体 DNA 基因序列。
J Eukaryot Microbiol. 2010 Mar-Apr;57(2):121-44. doi: 10.1111/j.1550-7408.2009.00462.x.

引用本文的文献

1
Comparative analysis of freshwater phytoplankton communities in two lakes of Burabay National Park using morphological and molecular approaches.采用形态学和分子学方法比较分析布拉拜国家公园内两湖的淡水浮游植物群落。
Sci Rep. 2021 Aug 9;11(1):16130. doi: 10.1038/s41598-021-95223-z.
2
Consistency of Targeted Metatranscriptomics and Morphological Characterization of Phytoplankton Communities.浮游植物群落靶向宏转录组学与形态特征的一致性
Front Microbiol. 2020 Feb 6;11:96. doi: 10.3389/fmicb.2020.00096. eCollection 2020.