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鉴定链霉菌 SK 葡萄糖异构酶活性和热稳定性的关键残基。

Identification of critical residues for the activity and thermostability of Streptomyces sp. SK glucose isomerase.

机构信息

Laboratoire de Micro-organismes et de Biomolécules, Centre de Biotechnologie de Sfax, Université de Sfax, BP "1177", 3018, Sfax, Tunisia.

出版信息

Appl Microbiol Biotechnol. 2013 Nov;97(22):9715-26. doi: 10.1007/s00253-013-4784-2. Epub 2013 Mar 6.

Abstract

The role of residue 219 in the physicochemical properties of D-glucose isomerase from Streptomyces sp. SK strain (SKGI) was investigated by site-directed mutagenesis and structural studies. Mutants G219A, G219N, and G219F were generated and characterized. Comparative studies of their physicochemical properties with those of the wild-type enzyme highlighted that mutant G219A displayed increased specific activity and thermal stability compared to that of the wild-type enzyme, while for G219N and G219F, these properties were considerably decreased. A double mutant, SKGI F53L/G219A, displayed a higher optimal temperature and a higher catalytic efficiency than both the G219A mutant and the wild-type enzyme and showed a half-life time of about 150 min at 85 °C as compared to 50 min for wild-type SKGI. Crystal structures of SKGI wild-type and G219A enzymes were solved to 1.73 and 2.15 Å, respectively, and showed that the polypeptide chain folds into two structural domains. The larger domain consists of a (β/α)8 unit, and the smaller domain forms a loop of α helices. Detailed analyses of the three-dimensional structures highlighted minor but important changes in the active site region as compared to that of the wild-type enzyme leading to a displacement of both metal ions, and in particular that in site M2. The structural analyses moreover revealed how the substitution of G219 by an alanine plays a crucial role in improving the thermostability of the mutant enzyme.

摘要

通过定点突变和结构研究,研究了来自链霉菌 SK 株(SKGI)的 D-葡萄糖异构酶残基 219 对其理化性质的作用。生成并表征了突变体 G219A、G219N 和 G219F。与野生型酶的理化性质进行比较研究,突出显示突变体 G219A 的比活和热稳定性比野生型酶高,而 G219N 和 G219F 的这些性质则大大降低。双突变体 SKGI F53L/G219A 的最适温度和催化效率均高于 G219A 突变体和野生型酶,在 85°C 下半衰期约为 150 分钟,而野生型 SKGI 为 50 分钟。分别解析了 SKGI 野生型和 G219A 酶的晶体结构,分辨率分别为 1.73 和 2.15 Å,表明多肽链折叠成两个结构域。较大的结构域由(β/α)8 单元组成,较小的结构域形成α螺旋环。与野生型酶相比,对三维结构的详细分析显示活性位点区域的微小但重要的变化导致两个金属离子发生位移,特别是在 M2 位点。结构分析还揭示了 G219 被丙氨酸取代如何在提高突变酶的热稳定性方面发挥关键作用。

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