Department of Ecology and Evolutionary Biology, UC Irvine, Irvine, CA, 92697, USA.
Department of Mathematics, UC Irvine, Irvine, CA, 92607, USA.
New Phytol. 2013 Jul;199(1):264-276. doi: 10.1111/nph.12247. Epub 2013 Apr 2.
It is still an open question as to whether genome size (GS) variation is shaped by natural selection. One approach to address this question is a population-level survey that assesses both the variation in GS and the relationship of GS to ecological variants. We assessed GS in Zea mays, a species that includes the cultivated crop, maize, and its closest wild relatives, the teosintes. We measured GS in five plants of each of 22 maize landraces and 21 teosinte populations from Mexico sampled from parallel altitudinal gradients. GS was significantly smaller in landraces than in teosintes, but the largest component of GS variation was among landraces and among populations. In maize, GS correlated negatively with altitude; more generally, the best GS predictors were linked to geography. By contrast, GS variation in teosintes was best explained by temperature and precipitation. Overall, our results further document the size flexibility of the Zea genome, but also point to a drastic shift in patterns of GS variation since domestication. We argue that such patterns may reflect the indirect action of selection on GS, through a multiplicity of phenotypes and life-history traits.
GS 大小(genome size,GS)的变异是否受自然选择影响,这仍然是一个悬而未决的问题。解决这个问题的一种方法是在种群水平上进行调查,评估 GS 的变异以及 GS 与生态变量的关系。我们评估了玉米属中的 GS,玉米属包括栽培作物玉米及其最近的野生亲缘种类蜀黍。我们测量了来自墨西哥的 22 个玉米地方品种和 21 个蜀黍种群的每个 5 株植物的 GS。地方品种的 GS 明显小于蜀黍,但 GS 变异的最大组成部分是在地方品种之间和种群之间。在玉米中,GS 与海拔呈负相关;更一般地说,GS 的最佳预测因子与地理有关。相比之下,蜀黍中 GS 的变异最好由温度和降水来解释。总的来说,我们的结果进一步证明了玉米属基因组的大小灵活性,但也表明自驯化以来,GS 变异模式发生了急剧变化。我们认为,这些模式可能反映了选择对 GS 的间接作用,通过多种表型和生活史特征。