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利用 DNA 条码鉴定来自墨西哥科苏梅尔岛潮下带洞穴的棘皮动物(棘皮动物门)。

Identification of echinoderms (Echinodermata) from an anchialine cave in Cozumel Island, Mexico, using DNA barcodes.

机构信息

Posgrado en Ciencias del Mar y Limnología, Universidad Nacional Autónoma de México, México, DF, México.

出版信息

Mol Ecol Resour. 2013 Nov;13(6):1137-45. doi: 10.1111/1755-0998.12098. Epub 2013 Mar 29.

DOI:10.1111/1755-0998.12098
PMID:23551841
Abstract

The echinoderm species richness of the Aerolito de Paraiso anchialine cave, on Cozumel Island, in the Mexican Caribbean, is assessed on the basis of morphological and DNA barcoding data. We included specimens from this cave system and from different open sea areas, and employed two different approaches for species delineation based on DNA barcoding data: a 2% cox1 divergence and the general mixed Yule-coalescent (GMYC) approaches. We subsequently compared the results derived from these approaches with our morphospecies discrimination. A total of 188 cox1 sequences belonging to specimens of four echinoderm classes were examined. The 2% cox1 divergence and GMYC approaches recovered 78 and 70 putative species, respectively, 24 and 22 of which corresponded to specimens from the anchialine system. Of 26 echinoderm species identified in the cave system, seven appear to be endemic to it. Among these are Copidaster carvenicola Solís-Marín & Laguarda-Figueras, 2010, two morphologically distinctive, undescribed species belonging to Asterinides and Ophionereis and four probably cryptic undescribed species originally assigned to Amphipholis squamata (Delle Chiaje, 1839), Astropecten duplicatus Gray, 1840, Copidaster lymani (AH Clark, 1948) and Ophiothrix angulata (Say, 1825). Further research and protection of this particularly fragile ecosystem becomes urgent because construction of tourism developments is planned nearby.

摘要

基于形态学和 DNA 条码数据,评估了位于墨西哥加勒比海域科苏梅尔岛天堂岩潜穴(Aerolito de Paraiso anchialine cave)的棘皮动物物种丰富度。我们纳入了来自该洞穴系统和不同开阔海域的标本,并采用了两种基于 DNA 条码数据的不同物种划分方法:2%cox1 分歧和通用混合 Yule 合并(GMYC)方法。随后,我们将这些方法得出的结果与我们的形态物种区分进行了比较。共检查了属于四个棘皮动物类别的 188 个 cox1 序列。2%cox1 分歧和 GMYC 方法分别回收了 78 个和 70 个假定种,其中 24 个和 22 个分别对应于潜穴系统的标本。在洞穴系统中鉴定出的 26 种棘皮动物中,有 7 种似乎是其特有种。其中包括 Copidaster carvenicola Solís-Marín & Laguarda-Figueras, 2010,两种形态独特、未描述的物种,分别属于 Asterinides 和 Ophionereis,以及四种可能是原始分配给 Amphipholis squamata(Delle Chiaje, 1839)、Astropecten duplicatus Gray, 1840、Cupidaster lymani (AH Clark, 1948) 和 Ophiothrix angulata (Say, 1825) 的未描述的可能隐匿种。由于附近计划建造旅游开发项目,因此对这个特别脆弱的生态系统进行进一步的研究和保护变得紧迫。

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