Wadood Abdul, Riaz Muhammad, Jamal Syed Babar, Shah Masaud, Lodhi Muhammad Arif
Department of Biochemistry, UCS, Shankar, Abdul Wali Khan University Mardan, Mardan-23200, Pakistan.
Bioinformation. 2013;9(6):309-14. doi: 10.6026/97320630009309. Epub 2013 Mar 19.
NS3/4A protease is an important emerging target for the cure of hepatitis C. There are many inhibitors of HCV NS3/4A protease that are passing through the clinical improvement indicating momentous reduction in the viral infection rate of patients. In this study molecular docking via MOE-Dock program was used to evaluate binding interactions of ligands with HCV NS3/4A protease. The docking and experimental results were found in good correlation. The best conformations of ligands were analyzed for binding interactions with the residues of binding cavity of NS3/4A protease. The valuable binding interactions and docking scores were observed for compounds 01, 05, 06, 07, 08 and 09.
NS3/4A蛋白酶是治疗丙型肝炎的一个重要新兴靶点。有许多丙型肝炎病毒NS3/4A蛋白酶抑制剂正在通过临床改进阶段,这表明患者的病毒感染率显著降低。在本研究中,通过MOE-Dock程序进行分子对接,以评估配体与丙型肝炎病毒NS3/4A蛋白酶的结合相互作用。发现对接结果与实验结果具有良好的相关性。分析了配体的最佳构象与NS3/4A蛋白酶结合腔残基的结合相互作用。观察到化合物01、05、06、07、08和09具有有价值的结合相互作用和对接分数。