Generating accurate contact maps of transient long-range interactions in intrinsically disordered proteins by paramagnetic relaxation enhancement.
作者信息
Clore G Marius
机构信息
Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland, USA.
出版信息
Biophys J. 2013 Apr 16;104(8):1635-6. doi: 10.1016/j.bpj.2013.01.060.
Abstract
摘要
相似文献
1
Generating accurate contact maps of transient long-range interactions in intrinsically disordered proteins by paramagnetic relaxation enhancement.通过顺磁弛豫增强生成内在无序蛋白质中瞬态长程相互作用的精确接触图。
Biophys J. 2013 Apr 16;104(8):1635-6. doi: 10.1016/j.bpj.2013.01.060.
2
Average conformations determined from PRE data provide high-resolution maps of transient tertiary interactions in disordered proteins.从 PRE 数据中确定的平均构象为无规卷曲蛋白质中瞬态三级相互作用提供了高分辨率图谱。
Biophys J. 2013 Apr 16;104(8):1740-51. doi: 10.1016/j.bpj.2013.02.019.
3
Mapping long-range contacts in a highly unfolded protein.绘制高度展开蛋白质中的长程相互作用。
J Mol Biol. 2002 Sep 27;322(4):655-62. doi: 10.1016/s0022-2836(02)00847-1.
4
Molecular dynamics simulations of isolated helices of myoglobin.肌红蛋白孤立螺旋的分子动力学模拟。
Biochemistry. 1995 Jun 13;34(23):7614-21. doi: 10.1021/bi00023a007.
5
Dimer domain swapping versus monomer folding in apo-myoglobin studied by molecular simulations.通过分子模拟研究脱辅基肌红蛋白中的二聚体结构域交换与单体折叠
Phys Chem Chem Phys. 2015 Feb 21;17(7):5006-13. doi: 10.1039/c4cp05203j.
6
NMR maps giant molecules as they fold and flutter.
Science. 1997 Nov 7;278(5340):1014-5.
7
Folding proteins caught in the act.正在折叠的蛋白质被捕捉到了。
Science. 1996 Jul 5;273(5271):29-30. doi: 10.1126/science.273.5271.29.
8
Observation of distinct nanosecond and microsecond protein folding events.
Nat Struct Biol. 1996 Nov;3(11):923-6. doi: 10.1038/nsb1196-923.
9
The folding process of apomyoglobin.脱辅基肌红蛋白的折叠过程。
Protein Pept Lett. 2005 Apr;12(3):229-34. doi: 10.2174/0929866053587174.
10
Stepwise helix formation and chain compaction during protein folding.蛋白质折叠过程中的逐步螺旋形成和链压缩。
Proc Natl Acad Sci U S A. 2004 Feb 17;101(7):1793-4. doi: 10.1073/pnas.0308172101. Epub 2004 Feb 9.
引用本文的文献
1
Characterization of Weak Protein Domain Structure by Spin-Label Distance Distributions.通过自旋标记距离分布对弱蛋白质结构域结构的表征
Front Mol Biosci. 2021 Apr 12;8:636599. doi: 10.3389/fmolb.2021.636599. eCollection 2021.
本文引用的文献
1
Average conformations determined from PRE data provide high-resolution maps of transient tertiary interactions in disordered proteins.从 PRE 数据中确定的平均构象为无规卷曲蛋白质中瞬态三级相互作用提供了高分辨率图谱。
Biophys J. 2013 Apr 16;104(8):1740-51. doi: 10.1016/j.bpj.2013.02.019.
2
NMR characterization of long-range order in intrinsically disordered proteins.NMR 技术对无规卷曲蛋白质中长程有序结构的研究
J Am Chem Soc. 2010 Jun 23;132(24):8407-18. doi: 10.1021/ja101645g.
3
Mechanistic details of a protein-protein association pathway revealed by paramagnetic relaxation enhancement titration measurements.通过顺磁弛豫增强滴定测量揭示的蛋白质-蛋白质缔合途径的机制细节。
Proc Natl Acad Sci U S A. 2010 Jan 26;107(4):1379-84. doi: 10.1073/pnas.0909370107. Epub 2010 Jan 7.
4
Theory, practice, and applications of paramagnetic relaxation enhancement for the characterization of transient low-population states of biological macromolecules and their complexes.顺磁弛豫增强用于表征生物大分子及其复合物瞬态低丰度状态的理论、实践与应用。
Chem Rev. 2009 Sep;109(9):4108-39. doi: 10.1021/cr900033p.
5
Visualizing transient events in amino-terminal autoprocessing of HIV-1 protease.观察HIV-1蛋白酶氨基末端自加工过程中的瞬时事件。
Nature. 2008 Oct 2;455(7213):693-6. doi: 10.1038/nature07342.
6
Modeling transient collapsed states of an unfolded protein to provide insights into early folding events.对未折叠蛋白质的瞬时折叠状态进行建模，以深入了解早期折叠事件。
Proc Natl Acad Sci U S A. 2008 Apr 29;105(17):6278-83. doi: 10.1073/pnas.0710641105. Epub 2008 Apr 23.
7
Open-to-closed transition in apo maltose-binding protein observed by paramagnetic NMR.通过顺磁核磁共振观察到的脱辅基麦芽糖结合蛋白的开放到闭合转变
Nature. 2007 Oct 25;449(7165):1078-82. doi: 10.1038/nature06232.
8
Solution structure and dynamics of the complex between cytochrome c and cytochrome c peroxidase determined by paramagnetic NMR.通过顺磁核磁共振确定的细胞色素c与细胞色素c过氧化物酶复合物的溶液结构和动力学
Proc Natl Acad Sci U S A. 2006 Dec 12;103(50):18945-50. doi: 10.1073/pnas.0603551103. Epub 2006 Dec 4.
9
Practical aspects of (1)H transverse paramagnetic relaxation enhancement measurements on macromolecules.关于大分子的（1）H横向顺磁弛豫增强测量的实际方面。
J Magn Reson. 2007 Feb;184(2):185-95. doi: 10.1016/j.jmr.2006.10.003. Epub 2006 Nov 2.
10
Visualization of transient encounter complexes in protein-protein association.蛋白质-蛋白质相互作用中瞬时相遇复合物的可视化
Nature. 2006 Nov 16;444(7117):383-6. doi: 10.1038/nature05201. Epub 2006 Oct 15.
Zotero 插件