Department for Molecular Biology and Biochemistry, Center for Advanced Biotechnology and Medicine Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA.
Microb Cell Fact. 2013 Apr 19;12:36. doi: 10.1186/1475-2859-12-36.
To isolate over-secretors, we subjected to saturation mutagenesis, a strain of P.pastoris exporting E. coli alkaline phosphatase (EAP) fused to the secretory domain of the yeast α factor pheromone through cellular PHO1/KEX2 secretory processing signals as the α-sec-EAP reporter protein. Direct chromogenic staining for α-sec-EAP activity is non-specific as its NBT/BCIP substrate cross-reacts with cellular phosphatases which can be inhibited with Levulinic acid. However, the parental E(P) strain only exports detectable levels of α-sec-EAP at 69 hours and not within the 36 hour period post-seeding required for effective screening with the consequent absence of a reference for secretion. We substituted the endogenous cellular phosphatase activity as a comparative reference for secretion rate and levels as well as for colony alignment while elevating specificity and sensitivity of detection of the exported protein with other innovative modifications of the immuno-chromogenic staining application for screening protein export mutants.
Raising the specificity and utility of staining for α-sec-EAP activity required 5 modifications including some to published methods. These included, exploitation of endogenous phosphatase activity, reduction of the cell/protein burden, establishment of the direct relation between concentrations of transcriptional inducer and exported membrane immobilized protein and concentrations of protein exported into growth media, amplification of immuno-specificity and sensitivity of detection of α-sec-EAP reporter enzyme signal and restriction of staining to optimal concentrations of antisera and time periods. The resultant immuno-chromogenic screen allows for the detection of early secretion and as little as 1.3 fold over-secretion of α-sec-EAP reporter protein by E(M) mutants in the presence of 10 fold -216 fold higher concentrations of HSA.
The modified immuno-chromogenic screen is sensitive, specific and has led to the isolation of mutants E(M) over-secreting the α-sec-EAP reporter protein by a minimum of 50 fold higher levels than that exported by non-mutagenized E(P) parental strains. Unselected proteins were also over-secreted.
为了分离过度分泌体,我们对一株通过细胞 PHO1/KEX2 分泌加工信号将大肠杆菌碱性磷酸酶(EAP)与酵母α因子信号肽融合表达的毕赤酵母进行饱和诱变,作为α-sec-EAP 报告蛋白。由于其 NBT/BCIP 底物与细胞内磷酸酶发生交叉反应,直接显色法检测α-sec-EAP 活性是非特异性的,而这些磷酸酶可以用戊酸抑制。然而,亲本 E(P) 株仅在 69 小时内分泌可检测水平的α-sec-EAP,而不在接种后 36 小时内进行有效的筛选,因此缺乏分泌的参考。我们用内源性细胞磷酸酶活性替代分泌率和水平的比较参考,以及菌落对齐的参考,同时通过对免疫显色染色应用的其他创新改造,提高了对分泌蛋白的检测特异性和敏感性,从而筛选出蛋白分泌突变体。
提高对α-sec-EAP 活性染色的特异性和实用性需要进行 5 项改造,其中一些是对已发表方法的改造。这些改造包括利用内源性磷酸酶活性、减少细胞/蛋白负荷、建立转录诱导剂浓度与膜固定化分泌蛋白浓度以及分泌到生长培养基中的蛋白浓度之间的直接关系、提高α-sec-EAP 报告酶信号的免疫特异性和敏感性检测的灵敏度以及限制抗血清的染色浓度和时间。改良后的免疫显色筛选可以检测到早期分泌,并且在存在 10 倍至 216 倍更高浓度的 HSA 时,E(M) 突变体的α-sec-EAP 报告蛋白的过度分泌可达到 1.3 倍。
改良的免疫显色筛选具有敏感性、特异性,已经导致了通过至少 50 倍更高的水平来分离过度分泌α-sec-EAP 报告蛋白的 E(M) 突变体,比非诱变的 E(P) 亲本株系分泌的水平高。未选择的蛋白也过度分泌。