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分析常染色体显性脑白质营养不良中的 LMNB1 重复序列,有助于深入了解重复机制和等位基因特异性表达。

Analysis of LMNB1 duplications in autosomal dominant leukodystrophy provides insights into duplication mechanisms and allele-specific expression.

机构信息

Department of Medical Sciences,University of Torino, Torino, Italy.

出版信息

Hum Mutat. 2013 Aug;34(8):1160-71. doi: 10.1002/humu.22348. Epub 2013 May 28.

DOI:10.1002/humu.22348
PMID:23649844
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3714349/
Abstract

Autosomal dominant leukodystrophy (ADLD) is an adult onset demyelinating disorder that is caused by duplications of the lamin B1 (LMNB1) gene. However, as only a few cases have been analyzed in detail, the mechanisms underlying LMNB1 duplications are unclear. We report the detailed molecular analysis of the largest collection of ADLD families studied, to date. We have identified the minimal duplicated region necessary for the disease, defined all the duplication junctions at the nucleotide level and identified the first inverted LMNB1 duplication. We have demonstrated that the duplications are not recurrent; patients with identical duplications share the same haplotype, likely inherited from a common founder and that the duplications originated from intrachromosomal events. The duplication junction sequences indicated that nonhomologous end joining or replication-based mechanisms such fork stalling and template switching or microhomology-mediated break induced repair are likely to be involved. LMNB1 expression was increased in patients' fibroblasts both at mRNA and protein levels and the three LMNB1 alleles in ADLD patients show equal expression, suggesting that regulatory regions are maintained within the rearranged segment. These results have allowed us to elucidate duplication mechanisms and provide insights into allele-specific LMNB1 expression levels.

摘要

常染色体显性脑白质营养不良(ADLD)是一种成年起病的脱髓鞘疾病,由 lamin B1(LMNB1)基因重复引起。然而,由于只有少数病例进行了详细分析,LMNB1 重复的机制尚不清楚。我们报告了迄今为止对最大的 ADLD 家族集合进行的详细分子分析。我们确定了疾病所需的最小重复区域,在核苷酸水平上定义了所有的重复连接,并鉴定了首个反向 LMNB1 重复。我们已经证明这些重复不是重现的;具有相同重复的患者共享相同的单倍型,可能来自于一个共同的祖先,并且重复起源于染色体内事件。重复连接序列表明,非同源末端连接或基于复制的机制,如叉停顿和模板转换或微同源介导的断裂诱导修复,可能参与其中。患者成纤维细胞中的 LMNB1 表达在 mRNA 和蛋白质水平上均增加,ADLD 患者的三个 LMNB1 等位基因表达水平相等,表明在重排片段内维持了调节区。这些结果使我们能够阐明重复机制,并深入了解等位基因特异性 LMNB1 表达水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/89c436ebf1ab/humu0034-1160-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/ea30e92575d0/humu0034-1160-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/f40fcfb0c51a/humu0034-1160-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/712c597cae77/humu0034-1160-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/ede66ff1546b/humu0034-1160-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/89c436ebf1ab/humu0034-1160-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/ea30e92575d0/humu0034-1160-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/f40fcfb0c51a/humu0034-1160-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/712c597cae77/humu0034-1160-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/ede66ff1546b/humu0034-1160-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a77f/3807606/89c436ebf1ab/humu0034-1160-f5.jpg

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