Institute of Parasitology, Biology Centre of the Academy of Sciences of the Czech Republic, České Budějovice, Czech Republic.
PLoS One. 2013 May 3;8(5):e62562. doi: 10.1371/journal.pone.0062562. Print 2013.
A salivary proteome-transcriptome project on the hard tick Ixodes scapularis revealed that Kunitz peptides are the most abundant salivary proteins. Ticks use Kunitz peptides (among other salivary proteins) to combat host defense mechanisms and to obtain a blood meal. Most of these Kunitz peptides, however, remain functionally uncharacterized, thus limiting our knowledge about their biochemical interactions.
We discovered an unusual cysteine motif in a Kunitz peptide. This peptide inhibits several serine proteases with high affinity and was named tryptogalinin due to its high affinity for β-tryptase. Compared with other functionally described peptides from the Acari subclass, we showed that tryptogalinin is phylogenetically related to a Kunitz peptide from Rhipicephalus appendiculatus, also reported to have a high affinity for β-tryptase. Using homology-based modeling (and other protein prediction programs) we were able to model and explain the multifaceted function of tryptogalinin. The N-terminus of the modeled tryptogalinin is detached from the rest of the peptide and exhibits intrinsic disorder allowing an increased flexibility for its high affinity with its inhibiting partners (i.e., serine proteases).
By incorporating experimental and computational methods our data not only describes the function of a Kunitz peptide from Ixodes scapularis, but also allows us to hypothesize about the molecular basis of this function at the atomic level.
硬蜱Ixodes scapularis 的唾液蛋白质组学-转录组学项目表明,Kunitz 肽是最丰富的唾液蛋白质。蜱利用 Kunitz 肽(以及其他唾液蛋白质)来对抗宿主防御机制并获取血液餐。然而,这些 Kunitz 肽中的大多数仍然具有未知的功能,因此限制了我们对它们的生化相互作用的了解。
我们在 Kunitz 肽中发现了一个不寻常的半胱氨酸基序。该肽以高亲和力抑制几种丝氨酸蛋白酶,并因其对β-胰蛋白酶的高亲和力而被命名为 tryptogalinin。与 Acari 亚目中其他功能描述的肽相比,我们表明 tryptogalinin 与来自 Rhipicephalus appendiculatus 的 Kunitz 肽在系统发育上相关,该肽也被报道对 β-胰蛋白酶具有高亲和力。使用基于同源性建模(和其他蛋白质预测程序),我们能够对 tryptogalinin 的多功能性进行建模和解释。建模的 tryptogalinin 的 N 端与其余肽段分离,并表现出内在无序性,从而增加了与抑制伙伴(即丝氨酸蛋白酶)结合的高亲和力的灵活性。
通过结合实验和计算方法,我们的数据不仅描述了 Ixodes scapularis 的 Kunitz 肽的功能,而且还使我们能够在原子水平上假设该功能的分子基础。