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从尼罗罗非鱼(Oreochromis niloticus)的性腺转录组中鉴定出差异表达基因。

Characterization of gonadal transcriptomes from Nile tilapia (Oreochromis niloticus) reveals differentially expressed genes.

机构信息

Key Laboratory of Freshwater Fish Reproduction and Development, Ministry of Education, Key Laboratory of Aquatic Science of Chongqing, School of Life Science, Southwest University, Chongqing, PR China.

出版信息

PLoS One. 2013 May 3;8(5):e63604. doi: 10.1371/journal.pone.0063604. Print 2013.

Abstract

Four pairs of XX and XY gonads from Nile tilapia were sequenced at four developmental stages, 5, 30, 90, and 180 days after hatching (dah) using Illumina Hiseq(TM) technology. This produced 28 Gb sequences, which were mapped to 21,334 genes. Of these, 259 genes were found to be specifically expressed in XY gonads, and 69 were found to be specific to XX gonads. Totally, 187 XX- and 1,358 XY-enhanced genes were identified, and 2,978 genes were found to be co-expressed in XX and XY gonads. Almost all steroidogenic enzymes, including cyp19a1a, were up-regulated in XX gonads at 5 dah; but in XY gonads these enzymes, including cyp11b2, were significantly up-regulated at 90 dah, indicating that, at a time critical to sex determination, the XX fish produced estrogen and the XY fish did not produce androgens. The most pronounced expression of steroidogenic enzyme genes was observed at 30 and 90 dah for XX and XY gonads, corresponding to the initiation of germ cell meiosis in the female and male gonads, respectively. Both estrogen and androgen receptors were found to be expressed in XX gonads, but only estrogen receptors were expressed in XY gonads at 5 dah. This could explain why exogenous steroid treatment induced XX and XY sex reversal. The XX-enhanced expression of cyp19a1a and cyp19a1b at all stages suggests an important role for estrogen in female sex determination and maintenance of phenotypic sex. This work is the largest collection of gonadal transcriptome data in tilapia and lays the foundation for future studies into the molecular mechanisms of sex determination and maintenance of phenotypic sex in non-model teleosts.

摘要

四对 XX 和 XY 性腺从尼罗罗非鱼在孵化后 5、30、90 和 180 天(dah)的四个发育阶段使用 Illumina Hiseq(TM)技术进行测序。这产生了 28 Gb 的序列,这些序列被映射到 21334 个基因上。其中,有 259 个基因被发现特异性表达在 XY 性腺中,有 69 个基因被发现特异性表达在 XX 性腺中。总共鉴定出 187 个 XX-和 1358 个 XY-增强基因,发现 2978 个基因在 XX 和 XY 性腺中共同表达。几乎所有的类固醇生成酶,包括 cyp19a1a,在 5 dah 时在 XX 性腺中上调;但在 XY 性腺中,这些酶,包括 cyp11b2,在 90 dah 时显著上调,表明在性别决定的关键时期,XX 鱼产生雌激素,而 XY 鱼不产生雄激素。XX 和 XY 性腺中类固醇生成酶基因的表达最显著,分别发生在雌性和雄性性腺生殖细胞减数分裂的起始阶段。在 5 dah 时,XX 性腺中发现了雌激素受体和雄激素受体,而 XY 性腺中只发现了雌激素受体。这可以解释为什么外源性类固醇处理会诱导 XX 和 XY 性别反转。在所有阶段,cyp19a1a 和 cyp19a1b 的 XX 增强表达表明雌激素在雌性性别决定和表型性别维持中起着重要作用。这项工作是罗非鱼性腺转录组数据的最大集合,为未来研究非模型硬骨鱼类的性别决定和表型性别维持的分子机制奠定了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/faa9/3643912/2bbcf9a03e95/pone.0063604.g001.jpg

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