Lučić Bono, Sović Ivan, Batista Jadranko, Skala Karolj, Plavšić Dejan, Vikić-Topić Drazen, Bešlo Drago, Nikolić Sonja, Trinajstić Nenad
NMR Center, The Ruđer Boskovic Institute, PO Box 180, HR 10 002 Zagreb, Croatia.
Curr Comput Aided Drug Des. 2013 Jun;9(2):184-94. doi: 10.2174/1573409911309020004.
This review discusses structure-property modeling applications of a novel variant of the Randic connectivity index that is called the sum-connectivity index. We compare published one-descriptor quantitative structure-property relationship (QSPR) models obtained with the new sum-connectivity index and with the Randic connectivity index, called here the product-connectivity index. Additionally, the efficiency of both variants of connectivity indices in QSPR modeling is tested on five datasets of alkanes and two datasets of polycyclic hydrocarbons. Several physicochemical properties of alkanes (i.e. boiling and melting points, retention index, molar volume, molar refraction, heat of vaporization, standard Gibbs energy of formation, critical temperature, critical pressure, surface tension, density) and π- electronic energies of two sets of polycyclic hydrocarbons were correlated with the product- and sum-connectivity indices. A comparison of these QSPR models shows that both variants of connectivity indices are equivalent, and only slightly (but not significantly) better results are obtained with the sum-connectivity index. Inter-correlations between the product- and sum-connectivity indices are mostly linear with a slope very close to 1.0 for alkanes, and with a slope more different from 1.0 (0.88) for polycyclic compounds. The comparative analysis presented here supports the use of the sumconnectivity index in QSPR/QSAR studies together with the product-connectivity index. Further studies on larger and more heterogeneous datasets should test the sum-connectivity index in QSPR/QSAR models.
本综述讨论了一种名为和连接性指数的Randić连接性指数新变体的结构-性质建模应用。我们比较了用新的和连接性指数以及在此称为乘积连接性指数的Randić连接性指数获得的已发表的单描述符定量结构-性质关系(QSPR)模型。此外,在五个烷烃数据集和两个多环烃数据集上测试了连接性指数的两种变体在QSPR建模中的效率。烷烃的几种物理化学性质(即沸点、熔点、保留指数、摩尔体积、摩尔折射、汽化热、标准吉布斯生成能、临界温度、临界压力、表面张力、密度)以及两组多环烃的π电子能量与乘积连接性指数和和连接性指数相关。这些QSPR模型的比较表明,连接性指数的两种变体是等效的,使用和连接性指数仅获得了略微(但不显著)更好的结果。乘积连接性指数和和连接性指数之间的相互相关性大多是线性的,对于烷烃,斜率非常接近1.0,对于多环化合物,斜率与1.0更不同(0.88)。本文提出的比较分析支持在QSPR/QSAR研究中使用和连接性指数以及乘积连接性指数。对更大且更具异质性的数据集的进一步研究应在QSPR/QSAR模型中测试和连接性指数。