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本文引用的文献

1
Fish in the matrix: motor learning in a virtual world.鱼在矩阵中:虚拟世界中的运动学习。
Front Neural Circuits. 2013 Jan 25;6:125. doi: 10.3389/fncir.2012.00125. eCollection 2012.
2
Zebrafish larvae evade predators by sensing water flow.斑马鱼幼鱼通过感知水流来躲避捕食者。
J Exp Biol. 2013 Feb 1;216(Pt 3):388-98. doi: 10.1242/jeb.072751.
3
Body dynamics and hydrodynamics of swimming fish larvae: a computational study.鱼类幼虫游泳的身体动力学和水动力学:计算研究。
J Exp Biol. 2012 Nov 15;215(Pt 22):4015-33. doi: 10.1242/jeb.071837.
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Deep brain photoreceptors control light-seeking behavior in zebrafish larvae.深度脑感光器控制斑马鱼幼体的趋光行为。
Curr Biol. 2012 Nov 6;22(21):2042-7. doi: 10.1016/j.cub.2012.08.016. Epub 2012 Sep 20.
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Automated visual choice discrimination learning in zebrafish (Danio rerio).斑马鱼(Danio rerio)的自动视觉选择辨别学习
J Integr Neurosci. 2012 Mar;11(1):73-85. doi: 10.1142/S0219635212500057.
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Icy: an open bioimage informatics platform for extended reproducible research.Icy:一个开放的生物影像信息学平台,用于扩展可重复研究。
Nat Methods. 2012 Jun 28;9(7):690-6. doi: 10.1038/nmeth.2075.
7
Fin-tail coordination during escape and predatory behavior in larval zebrafish.幼鱼期斑马鱼在逃避和捕食行为中的尾鳍协调。
PLoS One. 2012;7(2):e32295. doi: 10.1371/journal.pone.0032295. Epub 2012 Feb 16.
8
Fear, anxiety, and control in the zebrafish.斑马鱼的恐惧、焦虑和控制。
Dev Neurobiol. 2012 Mar;72(3):395-403. doi: 10.1002/dneu.20873.
9
Prey capture behavior evoked by simple visual stimuli in larval zebrafish.幼鱼期斑马鱼对简单视觉刺激的捕食行为。
Front Syst Neurosci. 2011 Dec 16;5:101. doi: 10.3389/fnsys.2011.00101. eCollection 2011.
10
Methodology for reconstructing early zebrafish development from in vivo multiphoton microscopy.从活体多光子显微镜重建早期斑马鱼发育的方法。
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追踪群体中的斑马鱼幼鱼——现状与展望。

Tracking zebrafish larvae in group--status and perspectives.

机构信息

Department of Psychiatry and Behavioral Sciences, Center for Sleep Sciences, Beckman Center, Stanford University, Palo Alto, CA 94305, USA.

出版信息

Methods. 2013 Aug 15;62(3):292-303. doi: 10.1016/j.ymeth.2013.05.002. Epub 2013 May 24.

DOI:10.1016/j.ymeth.2013.05.002
PMID:23707495
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3775500/
Abstract

Video processing is increasingly becoming a standard procedure in zebrafish behavior investigations as it enables higher research throughput and new or better measures. This trend, fostered by the ever increasing performance-to-price ratio of the required recording and processing equipment, should be expected to continue in the foreseeable future, with video-processing based methods permeating more and more experiments and, as a result, expanding the very role of behavioral studies in zebrafish research. To assess whether the routine video tracking of zebrafish larvae directly in the Petri dish is a capability that can be expected in the near future, the key processing concepts are discussed and illustrated on published zebrafish studies when available or other animals when not.

摘要

视频处理在斑马鱼行为研究中越来越成为标准程序,因为它可以提高研究效率并提供新的或更好的测量方法。这种趋势受到所需记录和处理设备的性价比不断提高的推动,预计在可预见的未来还将继续,基于视频处理的方法将渗透到越来越多的实验中,从而扩展了行为研究在斑马鱼研究中的作用。为了评估在不久的将来是否可以直接在培养皿中对斑马鱼幼虫进行常规视频跟踪,讨论了关键的处理概念,并在可用时根据已发表的斑马鱼研究或其他动物的研究进行了说明。