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RNA聚合酶II介导的转录提前终止:终结的开始。

Premature termination of transcription by RNAP II: the beginning of the end.

作者信息

Contreras Xavier, Benkirane Monsef, Kiernan Rosemary

机构信息

Institut de Génétique Humaine; CNRS UPR1142, Laboratoire de Régulation des Gènes, Montpellier, France.

出版信息

Transcription. 2013 Mar-Apr;4(2):72-6. doi: 10.4161/trns.24148.

DOI:10.4161/trns.24148
PMID:23714697
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3646057/
Abstract

Transcription elongation is now recognized as an important mechanism of gene regulation in eukaryotes. A large number of genes undergo an early step in transcription that is rate limiting for expression. Genome-wide studies showing that RNA polymerase II accumulates to high densities near the promoters of many genes has led to the idea that promoter-proximal pausing of transcription is a widespread, rate-limiting step in early elongation. Recent evidence suggests that much of this paused RNA polymerase II is competent for transcription elongation. Here, we discuss recent studies suggesting that RNA polymerase II that accumulates nearby the promoter of a subset of genes is undergoing premature termination of transcription.

摘要

转录延伸如今被认为是真核生物中基因调控的一种重要机制。大量基因在转录过程中经历一个早期步骤,该步骤对基因表达具有限速作用。全基因组研究表明,RNA聚合酶II在许多基因的启动子附近高密度积累,这引发了一种观点,即转录在启动子近端的暂停是早期延伸过程中一个广泛存在的限速步骤。最近的证据表明,许多处于暂停状态的RNA聚合酶II具备进行转录延伸的能力。在此,我们讨论近期的研究,这些研究表明在一部分基因的启动子附近积累的RNA聚合酶II正在经历转录的过早终止。

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本文引用的文献

1
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Science. 2013 Feb 22;339(6122):950-3. doi: 10.1126/science.1229386.
2
The yeast cap binding complex modulates transcription factor recruitment and establishes proper histone H3K36 trimethylation during active transcription.酵母帽结合复合物在转录活跃期间调节转录因子的募集并建立适当的组蛋白 H3K36 三甲基化。
Mol Cell Biol. 2013 Feb;33(4):785-99. doi: 10.1128/MCB.00947-12. Epub 2012 Dec 10.
3
Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans.RNA 聚合酶 II 的启动子近端暂停:后生动物中的新兴作用。
Nat Rev Genet. 2012 Oct;13(10):720-31. doi: 10.1038/nrg3293.
4
Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII.微处理器、Setx、Xrn2 和 Rrp6 合作诱导 RNAPII 转录提前终止。
Cell. 2012 Sep 14;150(6):1147-57. doi: 10.1016/j.cell.2012.08.004.
5
DGCR8 HITS-CLIP reveals novel functions for the Microprocessor.DGCR8 HITS-CLIP 揭示了 Microprocessor 的新功能。
Nat Struct Mol Biol. 2012 Aug;19(8):760-6. doi: 10.1038/nsmb.2344. Epub 2012 Jul 15.
6
Regulating the regulators: the pervasive effects of Pol II pausing on stimulus-responsive gene networks.调控调控因子:Pol II 暂停对刺激反应性基因网络的普遍影响。
Genes Dev. 2012 May 1;26(9):933-44. doi: 10.1101/gad.187781.112.
7
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription.mRNA 脱帽因子和外切酶 Xrn2 参与广泛的 RNA 聚合酶 II 转录提前终止。
Mol Cell. 2012 May 11;46(3):311-24. doi: 10.1016/j.molcel.2012.03.006. Epub 2012 Apr 5.
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Biochim Biophys Acta. 2011 Jan;1809(1):34-45. doi: 10.1016/j.bbagrm.2010.11.001. Epub 2010 Nov 13.