Analytical Discipline and Centralized Instrument Facility, Central Salt and Marine Chemicals Research Institute Council of Scientific and Industrial Research, Bhavnagar, Gujarat 364 002, India.
Chem Biol Interact. 2013 Aug 25;204(3):185-90. doi: 10.1016/j.cbi.2013.05.013. Epub 2013 Jun 5.
We have examined the aging process of soman inhibited AChE using Density functional theory (DFT) calculations. The catalytic serine of AChE can be phosphonylated by the nerve agent soman, and subsequently can undergo an aging process. The consequences of irreversible inhibition of AChE due to the aging process is fatal for mammals. The DFT calculations shed light on some intricate features of aging process of soman inhibited AChE, which has been pondering in the literature. The DFT calculations (M05-2X/6-31G(∗) level of theory) performed with the model systems revealed that the dealkylation of pinacolyl group and the methyl migration takes place simultaneously. The role of pre-protonation and electrostatic stabilization by histidine (His440(+)) in catalyzing the aging process of soman inhibited AChE is energetically comparable. The aging process catalyzed by the histidine (His440(+)) residue reduces the free energy of activation by ∼14.0kcal/mol, which is in good agreement with the reported experimental results. Further, the calculated results reveal that tryptophan residue (Trp84) of the catalytic anionic subsite (CAS) assists the rearrangement reaction in the rearrangement process via cation-π interactions.
我们使用密度泛函理论(DFT)计算研究了沙林抑制的乙酰胆碱酯酶的老化过程。神经毒剂沙林可以使乙酰胆碱酯酶的催化丝氨酸膦酰化,随后可以经历老化过程。由于老化过程导致的乙酰胆碱酯酶的不可逆抑制对哺乳动物是致命的。DFT 计算揭示了一些关于沙林抑制的乙酰胆碱酯酶老化过程的复杂特征,这些特征一直是文献中关注的焦点。使用模型系统进行的 DFT 计算(M05-2X/6-31G(*)理论水平)表明,频哪醇基的脱烷基化和甲基迁移同时发生。脯氨酸(His440(+)预质子化和静电稳定化在催化沙林抑制的乙酰胆碱酯酶的老化过程中起着同等重要的作用。组氨酸(His440(+)残基催化的老化过程将活化自由能降低了约 14.0kcal/mol,这与报道的实验结果非常吻合。此外,计算结果表明,催化阴离子部位(CAS)的色氨酸残基(Trp84)通过阳离子-π 相互作用协助重排反应在重排过程中进行。