Biomolecular Interaction Centre and Department of Chemistry, University of Canterbury, Christchurch, New Zealand.
Protein Sci. 2013 Aug;22(8):1087-99. doi: 10.1002/pro.2293. Epub 2013 Jun 27.
Neisseria meningitidis is the causative agent of meningitis and meningococcal septicemia is a major cause of disease worldwide, resulting in brain damage and hearing loss, and can be fatal in a large proportion of cases. The enzyme 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase (DAH7PS) catalyzes the first reaction in the shikimate pathway leading to the biosynthesis of aromatic metabolites including the aromatic acids l-Trp, l-Phe, and l-Tyr. This pathway is absent in humans, meaning that enzymes of the pathway are considered as potential candidates for therapeutic intervention. As the entry point, feedback inhibition of DAH7PS by pathway end products is a key mechanism for the control of pathway flux. The structure of the single DAH7PS expressed by N. meningitidis was determined at 2.0 Å resolution. In contrast to the other DAH7PS enzymes, which are inhibited only by a single aromatic amino acid, the N. meningitidis DAH7PS was inhibited by all three aromatic amino acids, showing greatest sensitivity to l-Phe. An N. meningitidis enzyme variant, in which a single Ser residue at the bottom of the inhibitor-binding cavity was substituted to Gly, altered inhibitor specificity from l-Phe to l-Tyr. Comparison of the crystal structures of both unbound and Tyr-bound forms and the small angle X-ray scattering profiles reveal that N. meningtidis DAH7PS undergoes no significant conformational change on inhibitor binding. These observations are consistent with an allosteric response arising from changes in protein motion rather than conformation, and suggest ligands that modulate protein dynamics may be effective inhibitors of this enzyme.
脑膜炎奈瑟菌是脑膜炎的病原体,而脑膜炎球菌性败血症是全球范围内的主要疾病原因,导致脑损伤和听力损失,并且在很大比例的病例中可能是致命的。3-脱氧-D-阿拉伯庚酮糖-7-磷酸合酶(DAH7PS)酶催化芳香族代谢物生物合成的莽草酸途径中的第一个反应,包括芳香族氨基酸 l-Trp、l-Phe 和 l-Tyr。该途径在人类中不存在,这意味着该途径的酶被认为是治疗干预的潜在候选物。作为入口点,途径终产物对 DAH7PS 的反馈抑制是控制途径通量的关键机制。由 N. meningitidis 表达的单个 DAH7PS 的结构在 2.0 Å 分辨率下确定。与其他仅被单个芳香族氨基酸抑制的 DAH7PS 酶不同,N. meningitidis DAH7PS 被所有三种芳香族氨基酸抑制,对 l-Phe 的敏感性最高。N. meningitidis 酶变体中,抑制剂结合腔底部的单个 Ser 残基被 Gly 取代,将抑制剂特异性从 l-Phe 改变为 l-Tyr。比较未结合和 Tyr 结合形式的晶体结构以及小角度 X 射线散射曲线表明,N. meningtidis DAH7PS 在抑制剂结合时不会发生明显的构象变化。这些观察结果与由蛋白质运动变化而不是构象引起的变构反应一致,并表明调节蛋白质动力学的配体可能是该酶的有效抑制剂。