Mepco Schlenk Engineering College, Sivakasi, India.
Comput Biol Chem. 2013 Oct;46:39-47. doi: 10.1016/j.compbiolchem.2013.05.002. Epub 2013 May 24.
An attempt was made to develop a computational model based on artificial neural network and ant colony optimization to estimate the composition of medium components for maximizing the productivity of Penicillin G Acylase (PGA) enzyme from Escherichia coli DH5α strain harboring the plasmid pPROPAC. As a first step, an artificial neural network (ANN) model was developed to predict the PGA activity by considering the concentrations of seven important components of the medium. Design of experiments employing central composite design technique was used to obtain the training samples. In the second step, ant colony optimization technique for continuous domain was employed to maximize the PGA activity by finding the optimal inputs for the developed ANN model. Further, the effect of a combination of ant colony optimization for continuous domain with a preferential local search strategy was studied to analyze the performance. For a comparative study, the training samples were fed into the response surface methodology optimization software to maximize the PGA production. The obtained PGA activity (56.94 U/mL) by the proposed approach was found to be higher than that of the obtained value (45.60 U/mL) with the response surface methodology. The optimum solution obtained computationally was experimentally verified. The observed PGA activity (55.60 U/mL) exhibited a close agreement with the model predictions.
尝试开发一种基于人工神经网络和蚁群优化的计算模型,以估计中成分的组成,从而最大限度地提高携带有质粒 pPROPAC 的大肠杆菌 DH5α 菌株青霉素 G 酰化酶(PGA)的生产力。作为第一步,开发了一个人工神经网络(ANN)模型,通过考虑培养基中七种重要成分的浓度来预测 PGA 的活性。采用中心复合设计技术的实验设计用于获得训练样本。在第二步中,采用连续域的蚁群优化技术,通过为开发的 ANN 模型找到最佳输入来最大化 PGA 的活性。此外,研究了将连续域的蚁群优化与优先局部搜索策略相结合的效果,以分析性能。为了进行比较研究,将训练样本输入响应面法优化软件以最大化 PGA 的产量。与响应面法相比,所提出方法获得的 PGA 活性(56.94 U/mL)更高。通过实验验证了计算得到的最佳解决方案。观察到的 PGA 活性(55.60 U/mL)与模型预测值吻合较好。