Department of Computer Engineering, Eastern Mediterranean University, Famagusta, via Mersin-10, Turkey.
Neural Comput. 2013 Sep;25(9):2355-72. doi: 10.1162/NECO_a_00487. Epub 2013 Jun 18.
The effects of ion channel fluctuations on the transmembrane voltage activity are potentially profound in small-size excitable membrane patches. Different groups have extended Hodgkin-Huxley equations into stochastic differential equations to capture the effects of ion channel noise analytically (Fox & Lu, 1994; Linaro, Storace, & Giugliano, 2011; Güler, 2013). Studies have shown that the accuracy of spiking statistics by Fox and Lu's model does not match well with the corresponding statistics from the exact microscopic simulations. The models of both Linaro et al. and Güler, however, were found to produce highly accurate statistics. Here we extend the examination of these models to the case in which the rate functions for the opening and closing of gates are under the influence of noise. For that purpose, the usual rate functions are accompanied additively by Ornstein-Uhlenbeck-type stochastic angular variables. Moreover, we argue that the existence of such noise in the rate functions is a plausible physiological phenomenon for finite-size membranes. It is observed that the presence of noise in the rates is not effective on the degree of inaccuracies within the Fox and Lu model. Güler model's accuracy is found to remain high as in the case of noise free rates. But the performance of Linaro et al.'s model is seen to degrade seriously with the increasing strength of the introduced rate function noise. We attribute this failure of Linaro et al.'s model to the use of the covariance function of open channels at the steady state, in its derivation.
离子通道波动对跨膜电压活动的影响在小尺寸兴奋膜片上可能是深远的。不同的研究小组已经将 Hodgkin-Huxley 方程扩展为随机微分方程,以分析捕获离子通道噪声的影响(Fox & Lu,1994;Linaro,Storace 和 Giugliano,2011;Güler,2013)。研究表明,Fox 和 Lu 的模型对爆发统计数据的准确性与从微观模拟得到的相应统计数据不太匹配。然而,Linaro 等人的模型和 Güler 的模型都被发现产生了高度准确的统计数据。在这里,我们将这些模型的检验扩展到门的开启和关闭的速率函数受到噪声影响的情况。为此,通常的速率函数附加有 Ornstein-Uhlenbeck 型随机角变量。此外,我们认为这种噪声在速率函数中的存在对于有限大小的膜来说是一种合理的生理现象。结果表明,速率中的噪声存在不会对 Fox 和 Lu 模型的不准确程度产生影响。Güler 模型的准确性仍然很高,就像在无噪声速率的情况下一样。但是,随着引入的速率函数噪声强度的增加,Linaro 等人的模型的性能被发现严重下降。我们将 Linaro 等人的模型的这种失败归因于在推导过程中使用了稳态时的开放通道协方差函数。