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来自扩展青霉南极分离株的一个新的冷活性脂肪酶基因的编码。

A gene encoding a new cold-active lipase from an Antarctic isolate of Penicillium expansum.

机构信息

Australian School of Advanced Medicine, Faculty of Human Sciences, Macquarie University, Sydney, NSW 2109, Australia.

出版信息

Curr Genet. 2013 Aug;59(3):129-37. doi: 10.1007/s00294-013-0394-x. Epub 2013 Jun 19.

DOI:10.1007/s00294-013-0394-x
PMID:23779196
Abstract

Cold-active lipases are of significant interest as biocatalysts in industrial processes. We have identified a lipase that displayed activity towards long carbon-chain-p-nitrophenyl substrates (C12-C18) at 25 °C from the culture supernatant of an Antarctic Penicillium expansum strain assigned P. expansum SM3. Zymography revealed a protein band of around 30 kDa with activity towards olive oil. DNA fragments of a lipase gene designated as lipPE were isolated from the genomic DNA of P. expansum SM3 by genomic walking PCR. Subsequently, the complete genomic lipPE gene was amplified using gene-specific primers designed from the 5'- and 3'-regions. Reverse transcription PCR was used to amplify the lipPE cDNA. The deduced amino acid sequence consisted of 285 residues that included a predicted signal peptide. Three peptides identified by LC/MS/MS analysis of the proteins in the culture supernatant of P. expansum were also present in the deduced amino acid sequence of the lipPE gene suggesting that this gene encoded the lipase identified by initial zymogram activity analysis. Full analysis of the nucleotide and the deduced amino acid sequences indicated that the lipPE gene encodes a novel P. expansum lipase. The lipPE gene was expressed in E. coli for further characterization of the enzyme with a view of assessing its suitability for industrial applications.

摘要

冷活性脂肪酶作为工业过程中的生物催化剂具有重要意义。我们从南极扩展青霉菌株 P. expansum SM3 的培养上清液中鉴定出一种脂肪酶,该脂肪酶在 25°C 下对长碳链对硝基苯底物(C12-C18)具有活性。酶谱分析显示,一种约 30 kDa 的蛋白带对橄榄油具有活性。通过基因组步移 PCR 从 P. expansum SM3 的基因组 DNA 中分离出一种命名为 lipPE 的脂肪酶基因的 DNA 片段。随后,使用从 5'-和 3'-区域设计的基因特异性引物扩增了完整的基因组 lipPE 基因。使用反转录 PCR 扩增 lipPE cDNA。推导的氨基酸序列由 285 个残基组成,包括一个预测的信号肽。通过 LC/MS/MS 分析 P. expansum 培养上清液中的蛋白质鉴定出的三个肽段也存在于 lipPE 基因的推导氨基酸序列中,表明该基因编码了最初通过酶谱活性分析鉴定的脂肪酶。对核苷酸和推导的氨基酸序列的全面分析表明,lipPE 基因编码一种新型的扩展青霉脂肪酶。将 lipPE 基因在大肠杆菌中表达,以进一步表征该酶,评估其在工业应用中的适用性。

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