Department of Chemistry, Shahrood Branch, Islamic Azad University, Shahrood, Iran.
J Mol Graph Model. 2013 Jul;44:120-8. doi: 10.1016/j.jmgm.2013.04.002. Epub 2013 May 14.
Investigation of tautomerism and transition states in a derivative of 1,3,4-oxadiazole (A, B, C and D) in the gas phase and in solution and in a micro hydrated environment with 1-3 water molecules was performed by calculations at the DFT-B3LYP/6-311++G(d,p) level of theory. The solvent effect is taken into account via the self-consistent reaction field (SCRF) method. The geometries of four possible tautomers of 5-amino-1,3,4-oxadiazole-2(3H)-one were optimized in the gas phase and solution with polarized continuum model (PCM). It was found that in the gas phase and different solvents, A and C tautomers are the most stable and unstable forms, respectively. The results show that the tautomeric interconversion C to D has the lowest Gibbs free energy changes and so the highest equilibrium constant in the gas phase and solution. The equilibrium and rate constants of intermolecular tautomerism in the absence and presence of 1-3 molecules of water were also calculated. The calculated results show that the presence of water molecules considerably reduces the barrier energy of the various reactions. Therefore, this water-assisted tautomerism can be performed fast, especially, with the assistance of two molecules of water.
通过在 DFT-B3LYP/6-311++G(d,p)理论水平上的计算,研究了 1,3,4-噁二唑(A、B、C 和 D)衍生物在气相、溶液中和微水合环境(1-3 个水分子)中的互变异构和过渡态。通过自洽反应场(SCRF)方法考虑了溶剂效应。在气相和溶液中,用极化连续体模型(PCM)优化了 5-氨基-1,3,4-噁二唑-2(3H)-酮的四种可能互变异构体的几何形状。结果表明,在气相和不同溶剂中,A 和 C 互变异构体分别是最稳定和最不稳定的形式。结果表明,互变异构体 C 到 D 的转化具有最低的吉布斯自由能变化,因此在气相和溶液中的平衡常数最高。还计算了不存在和存在 1-3 个水分子时分子间互变异构的平衡和速率常数。计算结果表明,水分子的存在大大降低了各种反应的势垒能。因此,这种水辅助互变异构可以快速进行,特别是在两个水分子的协助下。