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四指马鲅(鲈形目:马鲅科)的线粒体全基因组及鲈形亚目轻链复制起点的比较

The complete mitochondrial genome of the fourfinger threadfin Eleutheronema tetradactylum (Perciforms: Polynemidae) and comparison of light strand replication origin within Percoidei.

作者信息

Zhang Bo, Sun Yuena, Shi Ge

机构信息

Laboratory for Marine Living Resources and Molecular Engineering, College of Marine Science, Zhejiang Ocean University , Zhoushan, Zhejiang Province , P.R. China.

出版信息

Mitochondrial DNA. 2014 Dec;25(6):411-3. doi: 10.3109/19401736.2013.809433. Epub 2013 Jul 2.

Abstract

The complete mitochondrial genome of Eleutheronema tetradactylum was determined, which was the first complete mitochondrial genome in Polynemidae family. The mitochondrial genome was 16,474 base pairs in length, encoding a standard set of 13 protein-coding genes, 2 ribosomal RNA genes, 22 tRNA genes and 2 main non-coding regions (the control region and the origin of the light strand replication). The overall base composition of E. tetradactylum is A 27.2%, C 29.9%, G 17.0% and T 25.9%, with a slight A + T bias of 53.1%. The mitochondrial genome of E. tetradactylum had common features about gene arrangement and tRNA structures compared with those of other vertebrate fishes. Two non-coding regions were also determined within its mitogenome. These mitogenome sequence data would play an important role in population genetics and phylogenetic analysis of the Polynemidae.

摘要

测定了四线无须魮的完整线粒体基因组,这是马鲅科的首个完整线粒体基因组。该线粒体基因组长度为16,474个碱基对,编码一套标准的13个蛋白质编码基因、2个核糖体RNA基因、22个tRNA基因以及2个主要的非编码区(控制区和轻链复制起点)。四线无须魮的总体碱基组成为A 27.2%、C 29.9%、G 17.0%和T 25.9%,A+T轻微偏向,占比53.1%。与其他硬骨鱼类相比,四线无须魮的线粒体基因组在基因排列和tRNA结构方面具有共同特征。在其有丝分裂基因组中还确定了两个非编码区。这些有丝分裂基因组序列数据将在马鲅科的群体遗传学和系统发育分析中发挥重要作用。

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