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在生物多样性丰富且地质活跃的加利福尼亚湾及其周边地区,沙质与石质潮间带等足目动物的系统地理学存在显著差异。

Contrasting phylogeography of sandy vs. rocky supralittoral isopods in the megadiverse and geologically dynamic Gulf of California and adjacent areas.

机构信息

Department of Wildlife and Fisheries Sciences, Texas A&M University, College Station, Texas, United States of America.

出版信息

PLoS One. 2013 Jul 2;8(7):e67827. doi: 10.1371/journal.pone.0067827. Print 2013.

DOI:10.1371/journal.pone.0067827
PMID:23844103
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3699670/
Abstract

Phylogeographic studies of animals with low vagility and restricted to patchy habitats of the supralittoral zone, can uncover unknown diversity and shed light on processes that shaped evolution along a continent's edge. The Pacific coast between southern California and central Mexico, including the megadiverse Gulf of California, offers a remarkable setting to study biological diversification in the supralittoral. A complex geological history coupled with cyclical fluctuations in temperature and sea level provided ample opportunities for diversification of supralittoral organisms. Indeed, a previous phylogeographic study of Ligia, a supralittoral isopod that has limited dispersal abilities and is restricted to rocky patches, revealed high levels of morphologically cryptic diversity. Herein, we examined phylogeographic patterns of Tylos, another supralittoral isopod with limited dispersal potential, but whose habitat (i.e., sandy shores) appears to be more extensive and connected than that of Ligia. We conducted Maximum Likelihood and Bayesian phylogenetic analyses on mitochondrial and nuclear DNA sequences. These analyses revealed multiple highly divergent lineages with discrete regional distributions, despite the recognition of a single valid species for this region. A traditional species-diagnostic morphological trait distinguished several of these lineages. The phylogeographic patterns of Tylos inside the Gulf of California show a deep and complex history. In contrast, patterns along the Pacific region between southern California and the Baja Peninsula indicate a recent range expansion, probably postglacial and related to changes in sea surface temperature (SST). In general, the phylogeographic patterns of Tylos differed from those of Ligia. Differences in the extension and connectivity of the habitats occupied by Tylos and Ligia may account for the different degrees of population isolation experienced by these two isopods and their contrasting phylogeographic patterns. Identification of divergent lineages of Tylos in the study area is important for conservation, as some populations are threatened by human activities.

摘要

对低迁移性且局限于潮间带斑块生境的动物进行系统地理学研究,可以揭示未知的多样性,并阐明塑造大陆边缘进化过程的因素。加利福尼亚南部和墨西哥中部之间的太平洋沿岸,包括生物多样性极高的加利福尼亚湾,为研究潮间带生物多样性提供了一个极好的环境。复杂的地质历史加上温度和海平面的周期性波动,为潮间带生物的多样化提供了充足的机会。事实上,之前对 Ligia 的系统地理学研究表明,这种潮间带等足目动物的扩散能力有限,且局限于岩石斑块,但它具有高度形态上隐蔽的多样性。在此,我们研究了另一种扩散能力有限但栖息地(即沙质海岸)似乎比 Ligia 更广泛和连通的潮间带等足目动物 Tylos 的系统地理学模式。我们对线粒体和核 DNA 序列进行了最大似然法和贝叶斯系统发育分析。尽管该地区只承认了一个有效物种,但这些分析揭示了多个具有离散区域分布的高度分化谱系。传统的物种诊断形态特征可以区分其中的几个谱系。加利福尼亚湾内的 Tylos 系统地理学模式显示出深刻而复杂的历史。相比之下,加利福尼亚南部和下加利福尼亚半岛之间的太平洋地区的模式表明了最近的范围扩张,可能是冰后期的结果,与海面温度 (SST) 的变化有关。总体而言,Tylos 的系统地理学模式与 Ligia 的模式不同。Tylos 和 Ligia 所占据的栖息地的延伸性和连通性的差异可能导致这两种等足目动物经历的种群隔离程度不同,以及它们具有对比鲜明的系统地理学模式。在研究区域识别 Tylos 的分化谱系对保护很重要,因为一些种群受到人类活动的威胁。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6799/3699670/44d0ab80ceca/pone.0067827.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6799/3699670/9b0593b0a901/pone.0067827.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6799/3699670/44d0ab80ceca/pone.0067827.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6799/3699670/9b0593b0a901/pone.0067827.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6799/3699670/44d0ab80ceca/pone.0067827.g002.jpg

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本文引用的文献

1
INTRASPECIFIC PHYLOGEOGRAPHY ACROSS THE POINT CONCEPTION BIOGEOGRAPHIC BOUNDARY.跨穴位生物地理边界的种内系统地理学
Evolution. 1998 Jun;52(3):734-745. doi: 10.1111/j.1558-5646.1998.tb03698.x.
2
HISTORICAL ALLOPATRY AND THE BIOGEOGRAPHY OF SPECIATION IN THE PROSOBRANCH SNAIL GENUS NUCELLA.历史替代分布与滨螺属前鳃亚纲蜗牛物种形成的生物地理学
Evolution. 1998 Jun;52(3):757-774. doi: 10.1111/j.1558-5646.1998.tb03700.x.
3
MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.MrBayes 3.2:在大型模型空间中进行高效的贝叶斯系统发育推断和模型选择。
南非(等足目:球潮虫科)的隐存多样性和系统地理格局。
PeerJ. 2023 Dec 4;11:e16529. doi: 10.7717/peerj.16529. eCollection 2023.
4
Cryptic Genetic Diversity in the Coastal Isopod from the Pacific Ocean.来自太平洋的沿海等足类动物的隐秘遗传多样性。
Zool Stud. 2023 Apr 24;62:e14. doi: 10.6620/ZS.2023.62-14. eCollection 2023.
5
Redescription of Giordani Soika, 1954 (Crustacea, Isopoda, Oniscidea) based on SEM and molecular data.基于扫描电子显微镜和分子数据对1954年的乔达尼·索伊卡(甲壳纲,等足目,潮虫亚目)进行重新描述
Zookeys. 2022 Feb 23;1087:123-139. doi: 10.3897/zookeys.1087.76668. eCollection 2022.
6
Concordant geographic and genetic structure revealed by genotyping-by-sequencing in a New Zealand marine isopod.通过对新西兰海洋等足类动物进行测序基因分型揭示的一致地理和遗传结构
Ecol Evol. 2020 Dec 2;10(24):13624-13639. doi: 10.1002/ece3.6802. eCollection 2020 Dec.
7
Population genetics and historical demographic inferences of the blue crab in the US based on microsatellites.基于微卫星的美国蓝蟹群体遗传学与历史人口统计学推断
PeerJ. 2019 Oct 14;7:e7780. doi: 10.7717/peerj.7780. eCollection 2019.
8
At the confluence of vicariance and dispersal: Phylogeography of cavernicolous springtails (Collembola: Arrhopalitidae, Tomoceridae) codistributed across a geologically complex karst landscape in Illinois and Missouri.在隔离分化与扩散的交汇处:分布于伊利诺伊州和密苏里州地质复杂岩溶地貌的洞穴跳虫(弹尾目:阿罗跳虫科、汤姆跳虫科)的系统地理学
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9
Multiple transisthmian divergences, extensive cryptic diversity, occasional long-distance dispersal, and biogeographic patterns in a marine coastal isopod with an amphi-American distribution.具有跨美洲分布的一种海洋沿岸等足类动物中的多次地峡分歧、广泛的隐存多样性、偶尔的远距离扩散及生物地理模式
Ecol Evol. 2016 Oct 6;6(21):7794-7808. doi: 10.1002/ece3.2397. eCollection 2016 Nov.
10
Molecular approaches uncover cryptic diversity in intertidal isopods (Crustacea, Isopoda, Ligiidae) across the southern Africa coastline.分子方法揭示了非洲南部海岸线潮间带等足类动物(甲壳纲,等足目,利吉科)中隐藏的多样性。
PeerJ. 2018 Apr 19;6:e4658. doi: 10.7717/peerj.4658. eCollection 2018.
Syst Biol. 2012 May;61(3):539-42. doi: 10.1093/sysbio/sys029. Epub 2012 Feb 22.
4
Partitionfinder: combined selection of partitioning schemes and substitution models for phylogenetic analyses.Partitionfinder:用于系统发育分析的分区方案和替代模型的联合选择。
Mol Biol Evol. 2012 Jun;29(6):1695-701. doi: 10.1093/molbev/mss020. Epub 2012 Jan 20.
5
Competitive exclusion: phylogeography's 'elephant in the room'?竞争排斥:系统地理学的“房间里的大象”?
Mol Ecol. 2011 Nov;20(21):4388-94. doi: 10.1111/j.1365-294X.2011.05286.x. Epub 2011 Sep 27.
6
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Mol Ecol Resour. 2010 May;10(3):564-7. doi: 10.1111/j.1755-0998.2010.02847.x. Epub 2010 Mar 1.
7
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.MEGA5:用于最大似然法、进化距离法和最大简约法的分子进化遗传学分析。
Mol Biol Evol. 2011 Oct;28(10):2731-9. doi: 10.1093/molbev/msr121. Epub 2011 May 4.
8
DNA barcoding of marine metazoa.海洋后生动物的 DNA 条形码技术。
Ann Rev Mar Sci. 2011;3:471-508. doi: 10.1146/annurev-marine-120308-080950.
9
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10
DendroPy: a Python library for phylogenetic computing.DendroPy:一个用于系统发育计算的 Python 库。
Bioinformatics. 2010 Jun 15;26(12):1569-71. doi: 10.1093/bioinformatics/btq228. Epub 2010 Apr 25.