Suppr超能文献

蛋白质中亮氨酸-精氨酸-谷氨酸(LRE)黏附基序,特别参考了羧酸酯酶/胆碱酯酶家族的蛋白质。

The Leu-Arg-Glu (LRE) adhesion motif in proteins of the neuromuscular junction with special reference to proteins of the carboxylesterase/cholinesterase family.

机构信息

Divisions of Paediatric Surgery/Molecular Biology and Human Genetics, Faculty of Health Sciences, Stellenbosch University, P.O. Box 19063, Tygerberg 7505, South Africa.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2013 Sep;8(3):231-43. doi: 10.1016/j.cbd.2013.06.001. Epub 2013 Jun 10.

Abstract

Short linear motifs confer evolutionary flexibility on proteins as they can be added with relative ease allowing the acquisition of new functions. Such motifs may mediate a variety of signalling functions. The adhesion-mediating Leu-Arg-Glu (LRE) motif is enriched in laminin beta 2, and has been observed in other proteins, including members of the carboxylesterase/cholinesterase family. It acts as a stop signal for growing axons in the developing neuromuscular junction, binding to the voltage-gated calcium channel. In this bioinformatic analysis, we have investigated the presence of the motif in proteins of the neuromuscular junction, and have also examined its structural position and potential for ligand interaction, as well as phylogenetic conservation, in the carboxylesterase/cholinesterase family. The motif was observed to occur with a significantly higher frequency than expected in the UniProt/Swiss-Prot database, as well as in four individual species (human, mouse, Caenorhabditis elegans and Drosophila melanogaster). Examination of its presence in neuromuscular junction proteins showed it to be enriched in certain proteins of the synaptic basement membrane, including laminin, agrin, acetylcholinesterase and tenascin. A highly significant enrichment was observed in cytoskeletal proteins, particularly intermediate filament proteins and members of the spectrin family. In the carboxylesterase/cholinesterase family, the motif was observed in four conserved positions in the protein structure. It is present in the majority of mammalian acetylcholinesterases, as well as acetylcholinesterases from electric fish and a number of invertebrates. In insects, it is present in the ace-2, rather than in the synaptic ace-1, enzyme. It is also observed in the cholinesterase-like adhesion molecules (neuroligins, neurotactin and glutactin). It is never seen in butyrylcholinesterases, which do not mediate cell adhesion. In conclusion, the significant enrichment of the motif in certain classes of protein, as well as its conserved presence and structural positioning in one protein family, suggests that it has specific functions both in cell adhesion in the neuromuscular junction and in maintaining the structural integrity of the cytoskeleton.

摘要

短线性基序使蛋白质具有进化灵活性,因为它们可以相对容易地添加,从而获得新的功能。这种基序可能介导各种信号转导功能。黏附介导的亮氨酸-精氨酸-谷氨酸(LRE)基序富含层粘连蛋白β2,并且在其他蛋白质中也观察到,包括羧酸酯酶/胆碱酯酶家族的成员。它作为发育中的神经肌肉接头中生长轴突的停止信号,与电压门控钙通道结合。在这项生物信息学分析中,我们研究了该基序在神经肌肉接头蛋白中的存在,还检查了其结构位置和配体相互作用的潜力,以及羧酸酯酶/胆碱酯酶家族中的系统发育保守性。与预期相比,该基序在 UniProt/Swiss-Prot 数据库以及四个单独物种(人类、小鼠、秀丽隐杆线虫和黑腹果蝇)中出现的频率显著更高。检查其在神经肌肉接头蛋白中的存在情况表明,它富含突触基底层某些蛋白质,包括层粘连蛋白、聚集素、乙酰胆碱酯酶和 tenascin。在细胞骨架蛋白中观察到高度显著的富集,特别是中间丝蛋白和 spectrin 家族成员。在羧酸酯酶/胆碱酯酶家族中,该基序在蛋白质结构的四个保守位置观察到。它存在于大多数哺乳动物乙酰胆碱酯酶中,以及电鱼和一些无脊椎动物的乙酰胆碱酯酶中。在昆虫中,它存在于 ace-2 中,而不是突触 ace-1 酶中。它也存在于胆碱酯酶样黏附分子(神经连接蛋白、神经钙黏蛋白和谷氨酰胺黏附蛋白)中。它从未在丁酰胆碱酯酶中观察到,而丁酰胆碱酯酶不介导细胞黏附。总之,该基序在某些蛋白质类别中的显著富集,以及在一个蛋白质家族中的保守存在和结构定位,表明它在神经肌肉接头中的细胞黏附和维持细胞骨架的结构完整性方面具有特定的功能。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验