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在群体感应的数学模型中连接分子和群体过程。

Linking molecular and population processes in mathematical models of quorum sensing.

机构信息

Colorado College, Colorado Sprigs, CO, USA,

出版信息

Bull Math Biol. 2013 Oct;75(10):1813-39. doi: 10.1007/s11538-013-9870-1. Epub 2013 Jul 27.

Abstract

Many bacteria alter their behaviors as a function of population density, via a process known as quorum sensing (QS). QS is achieved by the synthesis and detection of diffusible signal molecules, often involving complex signal transduction pathways and regulatory networks. Mathematical models have been developed to investigate a number of aspects of QS, resulting in a wide range of model structures; many have focused on either the molecular or the population scale. In this paper, I show that many published models fail to satisfy physical constraints (such as conservation of matter) or rely on a priori assumptions that may not be valid. I present new, simple models of canonical Gram-negative and Gram-positive QS systems, in both well-mixed and biofilm populations, focusing on the interaction between molecular and population processes. I show that this interaction may be crucial for several important features of QS, including bistability and the localization of QS in space. The results highlight the need to link molecular and population processes carefully in QS models, provide a general framework for understanding the behavior of complex system-specific models, and suggest new directions for both theoretical and experimental work.

摘要

许多细菌会根据种群密度的变化来改变它们的行为,这一过程被称为群体感应(QS)。QS 是通过合成和检测可扩散的信号分子来实现的,这些信号分子通常涉及复杂的信号转导途径和调控网络。已经开发了数学模型来研究 QS 的许多方面,从而产生了广泛的模型结构;其中许多模型要么集中在分子尺度上,要么集中在种群尺度上。在本文中,我表明许多已发表的模型未能满足物理约束(如物质守恒),或者依赖于可能不成立的先验假设。我提出了新的、简单的典型革兰氏阴性和革兰氏阳性 QS 系统模型,包括在均相和生物膜种群中的模型,重点研究了分子和种群过程之间的相互作用。我表明,这种相互作用对于 QS 的几个重要特征可能是至关重要的,包括双稳态和 QS 在空间中的定位。这些结果强调了在 QS 模型中需要仔细地将分子和种群过程联系起来,为理解特定于复杂系统的模型的行为提供了一个通用框架,并为理论和实验工作提出了新的方向。

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