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环肽作为蛋白质工程和药物设计应用的嫁接框架。

Cyclotides as grafting frameworks for protein engineering and drug design applications.

作者信息

Poth Aaron G, Chan Lai Y, Craik David J

机构信息

Institute for Molecular Bioscience, The University of Queensland, Brisbane, Queensland, 4072, Australia.

出版信息

Biopolymers. 2013 Sep;100(5):480-91. doi: 10.1002/bip.22284.

DOI:10.1002/bip.22284
PMID:23893608
Abstract

Cyclotides are a family of naturally occurring backbone-cyclized macrocyclic mini-proteins from plants that have a knotted trio of intramolecular disulfide bonds. Their structural features imbue cyclotides with extraordinary stability against degradation at elevated temperatures or in the presence of proteolytic enzymes. The plasticity of their intracysteine loop sequences is exemplified by the more than 250 natural cyclotides sequenced to date, and this tolerance to sequence variation, along with their diverse bioactivities, underpins the suitability of the cyclic cystine knot motif as a valuable drug design scaffold and research tool for protein engineering studies. Here, we review the recent literature on applications of cyclotides for the stabilization of peptide epitopes and related protein engineering studies. Possible future directions in this field are also described.

摘要

环肽是一类天然存在的、来自植物的主链环化大环小蛋白,具有分子内三对缠结的二硫键。它们的结构特征使环肽在高温或存在蛋白水解酶的情况下具有非凡的抗降解稳定性。迄今为止已测序的250多种天然环肽体现了其半胱氨酸内环序列的可塑性,这种对序列变异的耐受性以及它们多样的生物活性,支撑了环胱氨酸结基序作为有价值的药物设计支架和蛋白质工程研究工具的适用性。在此,我们综述了环肽在稳定肽表位方面的应用及相关蛋白质工程研究的最新文献。还描述了该领域未来可能的发展方向。

相似文献

1
Cyclotides as grafting frameworks for protein engineering and drug design applications.环肽作为蛋白质工程和药物设计应用的嫁接框架。
Biopolymers. 2013 Sep;100(5):480-91. doi: 10.1002/bip.22284.
2
Potential therapeutic applications of the cyclotides and related cystine knot mini-proteins.环肽及相关胱氨酸结微小蛋白的潜在治疗应用。
Expert Opin Investig Drugs. 2007 May;16(5):595-604. doi: 10.1517/13543784.16.5.595.
3
Thermal, chemical, and enzymatic stability of the cyclotide kalata B1: the importance of the cyclic cystine knot.环肽kalata B1的热稳定性、化学稳定性和酶稳定性:环胱氨酸结的重要性
Biochemistry. 2004 May 25;43(20):5965-75. doi: 10.1021/bi049711q.
4
The role of conserved Glu residue on cyclotide stability and activity: a structural and functional study of kalata B12, a naturally occurring Glu to Asp mutant.保守 Glu 残基在环肽稳定性和活性中的作用:天然存在的 Glu 到 Asp 突变体 kalata B12 的结构和功能研究。
Biochemistry. 2011 May 17;50(19):4077-86. doi: 10.1021/bi2004153. Epub 2011 Apr 25.
5
Oxidative folding of the cystine knot motif in cyclotide proteins.环肽蛋白中胱氨酸结基序的氧化折叠
Protein Pept Lett. 2005 Feb;12(2):147-52. doi: 10.2174/0929866053005863.
6
Disulfide folding pathways of cystine knot proteins. Tying the knot within the circular backbone of the cyclotides.胱氨酸结蛋白的二硫键折叠途径。在环肽的环状主链内打结。
J Biol Chem. 2003 Feb 21;278(8):6314-22. doi: 10.1074/jbc.M210492200. Epub 2002 Dec 12.
7
Plant cyclotides: A unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.植物环肽:一类独特的环状且带结的蛋白质家族,其定义了环胱氨酸结结构基序。
J Mol Biol. 1999 Dec 17;294(5):1327-36. doi: 10.1006/jmbi.1999.3383.
8
Discovery, structure, function, and applications of cyclotides: circular proteins from plants.环肽的发现、结构、功能及应用:来自植物的环状蛋白质
J Exp Bot. 2016 Aug;67(16):4801-12. doi: 10.1093/jxb/erw210. Epub 2016 May 23.
9
The cyclotides and related macrocyclic peptides as scaffolds in drug design.环肽及相关大环肽作为药物设计的骨架。
Curr Opin Drug Discov Devel. 2006 Mar;9(2):251-60.
10
Cyclotides, a novel ultrastable polypeptide scaffold for drug discovery.环肽,一种用于药物发现的新型超稳定多肽支架。
Curr Pharm Des. 2011 Dec;17(38):4294-307. doi: 10.2174/138161211798999438.

引用本文的文献

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Topological isomers of a potent wound healing peptide: Structural insights and implications for bioactivity.一种强效伤口愈合肽的拓扑异构体:结构见解及其对生物活性的影响。
J Biol Chem. 2025 Jul;301(7):110340. doi: 10.1016/j.jbc.2025.110340. Epub 2025 Jun 4.
2
Small and Versatile Cyclotides as Anti-infective Agents.小型多功能环肽作为抗感染剂
ACS Infect Dis. 2025 Feb 14;11(2):386-397. doi: 10.1021/acsinfecdis.4c00957. Epub 2025 Jan 22.
3
Immunosuppressive Cyclotides: A Promising Approach for Treating Autoimmune Diseases.免疫抑制环肽:治疗自身免疫性疾病的一种有前途的方法。
Protein J. 2024 Apr;43(2):159-170. doi: 10.1007/s10930-024-10188-y. Epub 2024 Mar 15.
4
Exploring a Structural Data Mining Approach to Design Linkers for Head-to-Tail Peptide Cyclization.探索一种结构数据挖掘方法,用于设计从头至尾肽环化的连接子。
J Chem Inf Model. 2023 Oct 23;63(20):6436-6450. doi: 10.1021/acs.jcim.3c00865. Epub 2023 Oct 12.
5
Probing GPCR Dimerization Using Peptides.使用肽段探究G蛋白偶联受体二聚化
Front Endocrinol (Lausanne). 2022 Jul 14;13:843770. doi: 10.3389/fendo.2022.843770. eCollection 2022.
6
Targeting protein-protein interaction for immunomodulation: A sunflower trypsin inhibitor analog peptidomimetic suppresses RA progression in CIA model.靶向蛋白-蛋白相互作用的免疫调节:向日葵胰蛋白酶抑制剂类似物肽拟似物抑制 CIA 模型中的 RA 进展。
J Pharmacol Sci. 2022 Jul;149(3):124-138. doi: 10.1016/j.jphs.2022.04.005. Epub 2022 Apr 25.
7
On the Utility of Chemical Strategies to Improve Peptide Gut Stability.论改善肽类肠道稳定性的化学策略的实用性。
J Med Chem. 2022 Apr 28;65(8):6191-6206. doi: 10.1021/acs.jmedchem.2c00094. Epub 2022 Apr 14.
8
Amino acid-derived defense metabolites from plants: A potential source to facilitate novel antimicrobial development.植物源氨基酸衍生防御代谢物:促进新型抗菌药物开发的潜在资源。
J Biol Chem. 2021 Jan-Jun;296:100438. doi: 10.1016/j.jbc.2021.100438. Epub 2021 Feb 19.
9
Modulation of co-stimulatory signal from CD2-CD58 proteins by a grafted peptide.通过嫁接肽对 CD2-CD58 蛋白的共刺激信号进行调节。
Chem Biol Drug Des. 2021 Mar;97(3):607-627. doi: 10.1111/cbdd.13797. Epub 2020 Oct 2.
10
Cellular Uptake and Cytosolic Delivery of a Cyclic Cystine Knot Scaffold.环胱氨酸结支架的细胞摄取与胞质递送
ACS Chem Biol. 2020 Jun 19;15(6):1650-1661. doi: 10.1021/acschembio.0c00297. Epub 2020 May 6.