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红藻门石花菜科厚网藻的质体基因组。

The plastid genome of the red macroalga Grateloupia taiwanensis (Halymeniaceae).

机构信息

Department of Biological Sciences, The University of Alabama, Tuscaloosa, Alabama, United States of America.

出版信息

PLoS One. 2013 Jul 19;8(7):e68246. doi: 10.1371/journal.pone.0068246. Print 2013.

Abstract

The complete plastid genome sequence of the red macroalga Grateloupia taiwanensis S.-M.Lin & H.-Y.Liang (Halymeniaceae, Rhodophyta) is presented here. Comprising 191,270 bp, the circular DNA contains 233 protein-coding genes and 29 tRNA sequences. In addition, several genes previously unknown to red algal plastids are present in the genome of G. taiwanensis. The plastid genomes from G. taiwanensis and another florideophyte, Gracilaria tenuistipitata var. liui, are very similar in sequence and share significant synteny. In contrast, less synteny is shared between G. taiwanensis and the plastid genome representatives of Bangiophyceae and Cyanidiophyceae. Nevertheless, the gene content of all six red algal plastid genomes here studied is highly conserved, and a large core repertoire of plastid genes can be discerned in Rhodophyta.

摘要

本文呈现了红色大型海藻仙菜(Grateloupia taiwanensis S.-M.Lin & H.-Y.Liang)的完整质体基因组序列。该环状 DNA 全长 191,270bp,包含 233 个蛋白质编码基因和 29 个 tRNA 序列。此外,该基因组还包含一些以前未知的红藻质体基因。仙菜质体基因组与另一种叶状红藻,细基江蓠( Gracilaria tenuistipitata var. liui)的序列非常相似,具有显著的同线性。相比之下,仙菜与囊泡藻纲和蓝藻纲的质体基因组代表之间的同线性较少。然而,所有这 6 种红藻质体基因组的基因内容高度保守,在红藻中可以辨别出一个大型质体基因核心库。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a86/3716797/5773a44ab1d5/pone.0068246.g001.jpg

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