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NCN-三齿钯配合物键合降缬氨酸的合成与自组装。

Synthesis and self-assembly of NCN-pincer Pd-complex-bound norvalines.

机构信息

International Research Center for Elements Science, Institute for Chemical Research, Kyoto University, Uji, Kyoto, 611-0011 (Japan), Fax: (+81) 774-38-3186; Department of Energy and Hydrocarbon Chemistry, Graduate School of Engineering, Kyoto University, Nishikyo-ku, Kyoto, 615-8510 (Japan).

出版信息

Chemistry. 2013 Sep 9;19(37):12356-75. doi: 10.1002/chem.201301513. Epub 2013 Aug 1.

DOI:10.1002/chem.201301513
PMID:23907820
Abstract

The NCN-pincer Pd-complex-bound norvalines Boc-D/L-[PdCl(dpb)]Nva-OMe (1) were synthesized in multigram quantities. The molecular structure and absolute configuration of 1 were unequivocally determined by single-crystal X-ray structure analysis. The robustness of 1 under acidic/basic conditions provides a wide range of N-/C-terminus convertibility based on the related synthetic transformations. Installation of a variety of functional groups into the N-/C-terminus of 1 was readily carried out through N-Boc- or C-methyl ester deprotection and subsequent condensations with carboxylic acids, R(1)COOH, or amines, R(2)NH2 , to give the corresponding N-/C-functionalized norvalines R(1)-D/L-[PdCl(dpb)]Nva-R(2) 2-9. The dipeptide bearing two Pd units 10 was successfully synthesized through the condensation of C-free 1 with N-free 1. The robustness of these Pd-bound norvalines was adequately demonstrated by the preservation of the optical purity and Pd unit during the synthetic transformations. The lipophilic Pd-bound norvalines L-2, Boc-L-[PdCl(dpb)]Nva-NH-n-C11H23, and L-4, n-C4H9CO-L-[PdCl(dpb)]Nva-NH-n-C11H23, self-assembled in aromatic solvents to afford supramolecular gels. The assembled structures in a thermodynamically stable single crystal of L-2 and kinetically stable supramolecular aggregates of L-2 were precisely elucidated by cryo-TEM, WAX, SAXS, UV/Vis, IR analyses, and single-crystal X-ray crystallography. An antiparallel β-sheet-type aggregate consisting of an infinite one-dimensional hydrogen-bonding network of amide groups and π-stacking of PdCl(dpb) moieties was observed in the supramolecular gel fiber of L-2, even though discrete dimers are assembled through hydrogen bonding in the thermodynamically stable single crystal of L-2. The disparate DSC profiles of the single crystal and xerogel of L-2 indicate different thermodynamics of the molecular assembly process.

摘要

NCN-夹持钯配合物结合的 Boc-D/L-[PdCl(dpb)]Nva-OME(1)被大量合成。通过单晶 X 射线结构分析明确确定了 1 的分子结构和绝对构型。1 在酸性/碱性条件下的坚固性为基于相关合成转化的 N-/C-末端转化提供了广泛的范围。通过 N-Boc-或 C-甲酯的脱保护以及随后与羧酸、R(1)COOH 或胺、R(2)NH2 的缩合,很容易将各种官能团安装到 1 的 N-/C-末端,得到相应的 N-/C-官能化的正缬氨酸 R(1)-D/L-[PdCl(dpb)]Nva-R(2)2-9。通过 C-无 1 与 N-无 1 的缩合成功合成了含有两个 Pd 单元的二肽 10。这些 Pd 结合的正缬氨酸的坚固性通过在合成转化过程中光学纯度和 Pd 单元的保留得到了充分证明。疏水性 Pd 结合的正缬氨酸 L-2、Boc-L-[PdCl(dpb)]Nva-NH-n-C11H23 和 L-4、n-C4H9CO-L-[PdCl(dpb)]Nva-NH-n-C11H23 在芳香族溶剂中自组装成超分子凝胶。通过低温透射电子显微镜、WAX、SAXS、UV/Vis、IR 分析和单晶 X 射线晶体学精确阐明了 L-2 中热力学稳定单晶中的组装结构和 L-2 中动力学稳定的超分子聚集体。在 L-2 的超分子凝胶纤维中观察到由酰胺基团的无限一维氢键网络和 PdCl(dpb) 部分的π-堆积组成的反平行β-折叠型聚集体,尽管在 L-2 的热力学稳定单晶中通过氢键组装离散的二聚体。L-2 的单晶和干凝胶的不同 DSC 图谱表明分子组装过程的热力学不同。

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