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酶促反应通用一级速率常数的公式化。

Formulation of a universal first-order rate constant for enzymatic reactions.

作者信息

Imoto Taiji

机构信息

Emeritus Professor, Graduate School of Pharmaceutical Sciences, Kyushu University.

出版信息

Biosci Biotechnol Biochem. 2013;77(8):1703-8. doi: 10.1271/bbb.130270. Epub 2013 Aug 7.

Abstract

It is a common practice to employ k(cat)[E]₀/K(m) as a first-order rate constant for the analysis of an enzymatic reaction, where [E]₀ is the total enzyme concentration. I describe in this report a serious shortcoming in analyzing enzymatic reactions when kcat[E]₀/K(m) is employed and show that k(cat)[E]₀/K(m) can only be applied under very limited conditions. I consequently propose the use of a more universal first-order rate constant, k(cat)ES/[S]₀, where ES is the initial equilibrium concentration of the ES-complex derived from [E]₀, [S]₀ and K(m). Employing k(cat)ES/[S]₀ as the first-order rate constant enables all enzymatic reactions to be reasonably simulated under a wide range of conditions, and the catalytic and binding contributions to the rate constant of any enzyme can be determined under any and all conditions.

摘要

将k(cat)[E]₀/K(m)用作分析酶促反应的一级速率常数是一种常见做法,其中[E]₀是总酶浓度。我在本报告中描述了使用kcat[E]₀/K(m)分析酶促反应时的一个严重缺陷,并表明k(cat)[E]₀/K(m)仅在非常有限的条件下适用。因此,我建议使用一个更通用的一级速率常数k(cat)ES/[S]₀,其中ES是由[E]₀、[S]₀和K(m)推导得出的ES复合物的初始平衡浓度。将k(cat)ES/[S]₀用作一级速率常数能够在广泛的条件下合理模拟所有酶促反应,并且可以在任何及所有条件下确定任何酶对速率常数的催化和结合贡献。

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