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利用患病状态、血清铁和 HLA 对遗传性血色素沉着症进行联合分离分析和连锁分析。

Combined segregation and linkage analysis of genetic hemochromatosis using affection status, serum iron, and HLA.

作者信息

Borecki I B, Lathrop G M, Bonney G E, Yaouanq J, Rao D C

机构信息

Division of Biostatistics, Washington University School of Medicine, St. Louis, MO 63110.

出版信息

Am J Hum Genet. 1990 Sep;47(3):542-50.

PMID:2393027
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1683860/
Abstract

Characterizing the distribution of parameters of iron metabolism by hemochromatosis genotype remains an important goal vis-à-vis potential screening strategies to identify individuals at genetic risk, since a specific marker to detect the abnormal gene has not been identified as yet. In the present investigation, we analyze serum iron values in ascertained families using a method which incorporates both segregation of the clinical affection status and the HLA linkage information to identify the underlying genotypes. The analysis is performed using an extension of the model presented by Bonney et al., comprising regressive models for segregation analysis and the multipoint linkage strategy implemented in LINKAGE. The gene was found to be completely recessive with respect to both clinical manifestations and serum iron abnormalities, with significant differences in expression by sex. Clinical manifestations were present for all male homozygotes in this data set, suggesting that the recessive hemochromatosis genotype is fully penetrant at all ages in males. This was not the case for younger females. Significant genotype-specific age and sex effects were found for serum iron values. It is interesting that deletion of the HLA marker information did not affect our ability to resolve the genetic model when we analyzed a bivariate phenotype. This serves as a reminder that a search for relevant biological markers can be equally important in discerning the genetic etiology of a disease trait, as a search for linked genetic markers.

摘要

鉴于尚未确定检测异常基因的特定标志物,通过血色素沉着症基因型来表征铁代谢参数的分布,对于识别具有遗传风险的个体的潜在筛查策略而言,仍然是一个重要目标。在本研究中,我们使用一种结合了临床患病状态的分离情况和HLA连锁信息的方法,来分析确诊家族中的血清铁值,以确定潜在的基因型。分析是使用Bonney等人提出的模型的扩展来进行的,该模型包括用于分离分析的回归模型以及在LINKAGE中实施的多点连锁策略。发现该基因在临床表现和血清铁异常方面均为完全隐性,且在表达上存在显著的性别差异。在该数据集中,所有男性纯合子均出现了临床表现,这表明隐性血色素沉着症基因型在男性所有年龄段均具有完全的外显率。年轻女性则并非如此。血清铁值存在显著的基因型特异性年龄和性别效应。有趣的是,当我们分析双变量表型时,删除HLA标志物信息并未影响我们解析遗传模型的能力。这提醒我们,寻找相关生物标志物在识别疾病性状的遗传病因方面,可能与寻找连锁遗传标志物同样重要。

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Combined segregation and linkage analysis of genetic hemochromatosis using affection status, serum iron, and HLA.利用患病状态、血清铁和 HLA 对遗传性血色素沉着症进行联合分离分析和连锁分析。
Am J Hum Genet. 1990 Sep;47(3):542-50.
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引用本文的文献

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Joint multipoint linkage analysis of multivariate qualitative and quantitative traits. I. Likelihood formulation and simulation results.多变量定性和定量性状的联合多点连锁分析。I. 似然性公式及模拟结果。
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46,XX, inv(6)(p21.1p23) in a pedigree with hereditary haemochromatosis.在一个患有遗传性血色素沉着症的家系中发现46,XX,inv(6)(p21.1p23) 。
J Med Genet. 1997 Jan;34(1):24-7. doi: 10.1136/jmg.34.1.24.
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Influence of genotype-dependent effects of covariates on the outcome of segregation analysis of the body mass index.协变量的基因型依赖性效应对体重指数分离分析结果的影响。
Am J Hum Genet. 1993 Sep;53(3):676-87.
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Anonymous marker loci within 400 kb of HLA-A generate haplotypes in linkage disequilibrium with the hemochromatosis gene (HFE).位于HLA - A基因400 kb范围内的匿名标记基因座产生与血色素沉着症基因(HFE)处于连锁不平衡状态的单倍型。
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本文引用的文献

1
Genetic analysis of idiopathic hemochromatosis using both qualitative (disease status) and quantitative (serum iron) information.利用定性(疾病状态)和定量(血清铁)信息对特发性血色素沉着症进行基因分析。
Am J Hum Genet. 1985 Jul;37(4):700-18.
2
HLA typing in idiopathic hemochromatosis: distinction between homozygotes and heterozygotes with biochemical expression.
Hepatology. 1981 Mar-Apr;1(2):120-6. doi: 10.1002/hep.1840010206.
3
Hereditary hemochromatosis. Analysis of laboratory expression of the disease by genotype in 18 pedigrees.遗传性血色素沉着症。18个家系中疾病实验室表现的基因型分析。
Am J Clin Pathol. 1982 Aug;78(2):196-207. doi: 10.1093/ajcp/78.2.196.
4
Bias of the estimated recombination fraction and lod score due to an association between a disease gene and a marker gene.由于疾病基因与标记基因之间的关联导致的重组率估计值和连锁对数得分的偏差。
Ann Hum Genet. 1982 Oct;46(4):363-72. doi: 10.1111/j.1469-1809.1982.tb01587.x.
5
Diagnosis of hemochromatosis in young subjects: predictive accuracy of biochemical screening tests.年轻受试者血色素沉着症的诊断:生化筛查试验的预测准确性
Gastroenterology. 1984 Sep;87(3):628-33.
6
Genetic and phenotypic expression of hemochromatosis in Canadians.加拿大人中铁色素沉着症的遗传与表型表达。
Clin Invest Med. 1983;6(3):171-9.
7
Strategies for multilocus linkage analysis in humans.人类多位点连锁分析策略。
Proc Natl Acad Sci U S A. 1984 Jun;81(11):3443-6. doi: 10.1073/pnas.81.11.3443.
8
An HLA-All association with the hemochromatosis allele?HLA与血色素沉着病等位基因存在关联?
Clin Genet. 1983 Sep;24(3):171-6. doi: 10.1111/j.1399-0004.1983.tb02234.x.
9
On the statistical determination of major gene mechanisms in continuous human traits: regressive models.关于人类连续性性状中主基因机制的统计学判定:回归模型
Am J Med Genet. 1984 Aug;18(4):731-49. doi: 10.1002/ajmg.1320180420.
10
A general model for the genetic analysis of pedigree data.家系数据遗传分析的通用模型。
Hum Hered. 1971;21(6):523-42. doi: 10.1159/000152448.