Hamilton James A
Boston University School of Medicine, Dept of Physiology and Biophysics, 700 Albany St., Boston, MA 02118, USA.
Biochim Biophys Acta. 2013 Dec;1830(12):5418-26. doi: 10.1016/j.bbagen.2013.08.002. Epub 2013 Aug 9.
The molecular details of fatty acid (FA) interactions with albumin are fundamental to understanding transport in the plasma and cellular utilization of these key nutrients and building blocks of membranes.
This review focuses on the development and application of NMR methods to study FA binding to albumin [bovine (BSA) and human (HSA)]. The key strategy was to use (13)C enrichment of a specific carbon in the FA as a non-perturbing probe to permit visualization of the small ligand complexed to the very large protein. NMR contributions to illuminating molecular interactions and FA dynamics are summarized from three decades of studies.
Our early studies detected multiple binding sites that we hypothesized were distinguished because of the unique tertiary structure of the protein in close proximity to the FA labeled carbon in each site. Later crystallographic structures revealed the presence of polar and charged amino acid side chains near the carboxyl carbon of the FA and unique tertiary structures lining all of the FA binding pockets. In collaboration with the crystallography group, several FA sites in the crystalline state were matched with NMR resonances in the solution state. With the newest application of NMR, 2D NMR spectroscopy detected nine binding sites, and three were located in the crystal structure through displacement of drugs with identified sites.
NMR spectroscopy utilizing the FA as a probe allows characterization of site-specific interactions, molecular motions within binding sites, the order of filling and removal of FA from sites. This article is part of a Special Issue entitled Serum Albumin.
脂肪酸(FA)与白蛋白相互作用的分子细节对于理解其在血浆中的转运以及这些关键营养物质和膜结构单元的细胞利用至关重要。
本综述聚焦于核磁共振(NMR)方法在研究FA与白蛋白[牛血清白蛋白(BSA)和人血清白蛋白(HSA)]结合方面的发展与应用。关键策略是利用FA中特定碳原子的(13)C富集作为一种非干扰性探针,以实现对与非常大的蛋白质结合的小配体的可视化。本文总结了三十年来NMR在阐明分子相互作用和FA动力学方面的贡献。
我们早期的研究检测到多个结合位点,我们推测这些位点因蛋白质的独特三级结构而有所不同,每个位点的三级结构都紧邻FA标记的碳原子。后来的晶体学结构揭示了在FA羧基碳附近存在极性和带电荷的氨基酸侧链,以及所有FA结合口袋内衬的独特三级结构。与晶体学团队合作,将晶体状态下的几个FA位点与溶液状态下的NMR共振进行了匹配。随着NMR的最新应用,二维NMR光谱检测到九个结合位点,其中三个通过用已确定位点的药物进行置换而定位在晶体结构中。
利用FA作为探针的NMR光谱能够表征位点特异性相互作用、结合位点内的分子运动、FA在位点上的填充和去除顺序。本文是名为《血清白蛋白》的特刊的一部分。