• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从 X 射线衍射中建模电子密度分布以推导光学性质:受约束波函数与多极精修。

Modeling electron density distributions from X-ray diffraction to derive optical properties: constrained wavefunction versus multipole refinement.

机构信息

Cavendish Laboratory, University of Cambridge, J. J. Thomson Avenue, Cambridge CB3 0HE, United Kingdom.

出版信息

J Chem Phys. 2013 Aug 14;139(6):064108. doi: 10.1063/1.4817662.

DOI:10.1063/1.4817662
PMID:23947844
Abstract

The rational design of next-generation optical materials requires an understanding of the connection between molecular structure and the solid-state optical properties of a material. A fundamental challenge is to utilize the accurate structural information provided by X-ray diffraction to explain the properties of a crystal. For years, the multipole refinement has been the workhorse technique for transforming high-resolution X-ray diffraction datasets into the detailed electron density distribution of crystalline material. However, the electron density alone is not sufficient for a reliable calculation of the nonlinear optical properties of a material. Recently, the X-ray constrained wavefunction refinement has emerged as a viable alternative to the multipole refinement, offering several potential advantages, including the calculation of a wide range of physical properties and seeding the refinement process with a physically reasonable starting point. In this study, we apply both the multipole refinement and the X-ray constrained wavefunction technique to four molecules with promising nonlinear optical properties and diverse structural motifs. In general, both techniques obtain comparable figures of merit and generate largely similar electron densities, demonstrating the wide applicability of the X-ray constrained wavefunction method. However, there are some systematic differences between the electron densities generated by each technique. Importantly, we find that the electron density generated using the X-ray constrained wavefunction method is dependent on the exact location of the nuclei. The X-ray constrained wavefunction refinement makes smaller changes to the wavefunction when coordinates from the Hartree-Fock-based Hirshfeld atom refinement are employed rather than coordinates from the multipole refinement, suggesting that coordinates from the Hirshfeld atom refinement allow the X-ray constrained wavefunction method to produce more accurate wavefunctions. We then use the experimentally derived wavefunctions to calculate the molecular dipole moment, polarizability, hyperpolarizability, and refractive index and show that these are in good agreement with the values calculated using ab initio methods. Thus, this study shows that experimental wavefunctions can be reliably generated from X-ray diffraction datasets, and that optical properties can be reliably calculated from these wavefunctions. Such a concerted interplay of experiment and computation via the X-ray constrained wavefunction refinement stands to enable the molecular engineering of tailor-made next-generation optical materials.

摘要

新一代光学材料的合理设计需要了解分子结构与材料固态光学性质之间的联系。一个基本的挑战是利用 X 射线衍射提供的精确结构信息来解释晶体的性质。多年来,多极精修一直是将高分辨率 X 射线衍射数据集转换为晶体材料详细电子密度分布的主力技术。然而,仅电子密度对于可靠地计算材料的非线性光学性质是不够的。最近,X 射线约束波函数精修已成为多极精修的可行替代方法,具有多种潜在优势,包括计算广泛的物理性质和用物理上合理的起点播种精修过程。在这项研究中,我们将多极精修和 X 射线约束波函数技术应用于四个具有有前途的非线性光学性质和不同结构基序的分子。一般来说,两种技术都获得了可比的优值,并生成了大致相似的电子密度,证明了 X 射线约束波函数方法的广泛适用性。然而,两种技术生成的电子密度之间存在一些系统差异。重要的是,我们发现使用 X 射线约束波函数方法生成的电子密度取决于核的精确位置。当使用基于 Hartree-Fock 的 Hirshfeld 原子精修的坐标而不是多极精修的坐标时,X 射线约束波函数精修对波函数的变化较小,这表明 Hirshfeld 原子精修的坐标允许 X 射线约束波函数方法生成更准确的波函数。然后,我们使用实验得出的波函数来计算分子偶极矩、极化率、超极化率和折射率,并表明这些值与使用从头算方法计算的值吻合良好。因此,本研究表明,可以从 X 射线衍射数据集可靠地生成实验波函数,并且可以从这些波函数可靠地计算光学性质。通过 X 射线约束波函数精修的实验和计算的协同作用,有望实现定制下一代光学材料的分子工程。

相似文献

1
Modeling electron density distributions from X-ray diffraction to derive optical properties: constrained wavefunction versus multipole refinement.从 X 射线衍射中建模电子密度分布以推导光学性质:受约束波函数与多极精修。
J Chem Phys. 2013 Aug 14;139(6):064108. doi: 10.1063/1.4817662.
2
Wavefunctions derived from experiment. III. Topological analysis of crystal fragments.源自实验的波函数。III. 晶体片段的拓扑分析。
Acta Crystallogr A. 2002 May;58(Pt 3):232-43. doi: 10.1107/s010876730200137x. Epub 2002 Apr 18.
3
Effective molecular polarizabilities and crystal refractive indices estimated from x-ray diffraction data.根据X射线衍射数据估算的有效分子极化率和晶体折射率。
J Chem Phys. 2006 Nov 7;125(17):174505. doi: 10.1063/1.2364897.
4
Hirshfeld atom refinement for modelling strong hydrogen bonds.用于模拟强氢键的赫希菲尔德原子精修
Acta Crystallogr A Found Adv. 2014 Sep;70(Pt 5):483-98. doi: 10.1107/S2053273314012443. Epub 2014 Aug 30.
5
Wavefunctions derived from experiment. II. A wavefunction for oxalic acid dihydrate.源自实验的波函数。II. 二水合草酸的波函数。
Acta Crystallogr A. 2001 Jan;57(Pt 1):87-100. doi: 10.1107/s0108767300013167.
6
Energetics of interactions in the solid state of 2-hydroxy-8--quinoline derivatives ( = Cl, Br, I, S-Ph): comparison of Hirshfeld atom, X-ray wavefunction and multipole refinements.2-羟基-8-喹啉衍生物(= Cl、Br、I、S-Ph)固态相互作用的能量学:Hirshfeld原子、X射线波函数和多极精修的比较
IUCrJ. 2019 Jul 15;6(Pt 5):868-883. doi: 10.1107/S2052252519007358. eCollection 2019 Sep 1.
7
Can X-ray constrained Hartree-Fock wavefunctions retrieve electron correlation?X射线约束哈特里-福克波函数能否恢复电子关联?
IUCrJ. 2017 Jan 10;4(Pt 2):136-146. doi: 10.1107/S2052252516019217. eCollection 2017 Mar 1.
8
Comparative experimental electron density and electron localization function study of thymidine based on 20 K X-ray diffraction data.基于20K X射线衍射数据的胸腺嘧啶核苷的比较实验电子密度和电子定位函数研究。
Acta Crystallogr B. 2008 Jun;64(Pt 3):363-74. doi: 10.1107/S0108768108005776. Epub 2008 May 15.
9
X-ray constrained wavefunctions based on Hirshfeld atoms. I. Method and review.基于希夫菲尔德原子的 X 射线限制波函数。I. 方法与综述。
Acta Crystallogr B Struct Sci Cryst Eng Mater. 2022 Jun 1;78(Pt 3 Pt 1):312-332. doi: 10.1107/S2052520622004097. Epub 2022 May 31.
10
Refractive indices for molecular crystals from the response of X-ray constrained Hartree-Fock wavefunctions.基于X射线约束哈特里-福克波函数响应的分子晶体折射率
Phys Chem Chem Phys. 2009 Sep 7;11(33):7209-18. doi: 10.1039/b906072c. Epub 2009 Jun 10.

引用本文的文献

1
Inversion of the X-ray restrained wavefunction equations: a first step towards the development of exchange-correlation functionals based on X-ray data.X射线约束波函数方程的反演:基于X射线数据开发交换相关泛函的第一步。
J Appl Crystallogr. 2025 Jul 25;58(Pt 4):1106-1121. doi: 10.1107/S1600576725004765. eCollection 2025 Aug 1.
2
Further Validation of Quantum Crystallography Approaches.量子晶体学方法的进一步验证。
Molecules. 2021 Jun 18;26(12):3730. doi: 10.3390/molecules26123730.
3
: an interface for quantum crystallography.
用于量子晶体学的接口。
J Appl Crystallogr. 2021 Apr 16;54(Pt 3):987-995. doi: 10.1107/S1600576721002545. eCollection 2021 Jun 1.
4
Energetics of interactions in the solid state of 2-hydroxy-8--quinoline derivatives ( = Cl, Br, I, S-Ph): comparison of Hirshfeld atom, X-ray wavefunction and multipole refinements.2-羟基-8-喹啉衍生物(= Cl、Br、I、S-Ph)固态相互作用的能量学:Hirshfeld原子、X射线波函数和多极精修的比较
IUCrJ. 2019 Jul 15;6(Pt 5):868-883. doi: 10.1107/S2052252519007358. eCollection 2019 Sep 1.
5
Quantum crystallography.量子晶体学
Chem Sci. 2017 Jun 1;8(6):4159-4176. doi: 10.1039/c6sc05504d. Epub 2017 Mar 27.
6
Charge density analysis for crystal engineering.晶体工程中的电荷密度分析
Chem Cent J. 2014 Dec 16;8(1):68. doi: 10.1186/s13065-014-0068-x. eCollection 2014.
7
Hirshfeld atom refinement.希夫菲尔德原子精修。
IUCrJ. 2014 Aug 29;1(Pt 5):361-79. doi: 10.1107/S2052252514014845. eCollection 2014 Sep 1.