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在脂质膜中用MTSL氮氧化物自旋标记修饰的二棕榈酰磷脂酰胆碱的分子动力学模拟。

Molecular dynamics simulation of dipalmitoylphosphatidylcholine modified with a MTSL nitroxide spin label in a lipid membrane.

作者信息

Kemmerer Sabrina, Voss John C, Faller Roland

机构信息

Department of Chemical Engineering and Materials Science, UC Davis, Davis, CA, USA; Eduard-Zintl-Institute, Department of Chemistry, Technical University of Darmstadt, Darmstadt, Germany.

出版信息

Biochim Biophys Acta. 2013 Nov;1828(11):2770-7. doi: 10.1016/j.bbamem.2013.07.030. Epub 2013 Aug 13.

Abstract

We investigate the interaction between dipalmitoylphosphatidylcholine (DPPC) and a nitroxide spin label in order to understand its influences on lipid structure and dynamics using molecular dynamics simulations. The system was modified by covalently attaching nitroxide spin labels to the headgroups of two DPPC molecules. (S-(2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl methanesulfonothioate) (MTSL) was used as the spin label. The label position and dynamics were analyzed as was the impact of the modified DPPC on the structure of the surrounding lipids. The modified DPPC molecules locate closer to the center of the membrane than unmodified DPPC molecules. The rotation of the spin label is unrestricted, but there are favored orientations. MTSL depresses the deuterium order parameters of the carbon atoms close to the headgroup in surrounding DPPC molecules. The spin label has no impact on order parameters of carbon atoms at the end of the lipid tails. The lateral diffusion constant of the modified DPPC is indistinguishable from unmodified DPPC molecules. These novel computational results suggest an experimental validation.

摘要

我们通过分子动力学模拟研究二棕榈酰磷脂酰胆碱(DPPC)与氮氧化物自旋标记物之间的相互作用,以了解其对脂质结构和动力学的影响。通过将氮氧化物自旋标记物共价连接到两个DPPC分子的头部基团对系统进行了修饰。使用(S-(2,2,5,5-四甲基-2,5-二氢-1H-吡咯-3-基)甲基甲磺硫酯)(MTSL)作为自旋标记物。分析了标记物的位置和动力学以及修饰后的DPPC对周围脂质结构的影响。修饰后的DPPC分子比未修饰的DPPC分子更靠近膜中心。自旋标记物的旋转不受限制,但存在有利的取向。MTSL降低了周围DPPC分子中靠近头部基团的碳原子的氘序参数。自旋标记物对脂质尾部末端碳原子的序参数没有影响。修饰后的DPPC的横向扩散常数与未修饰的DPPC分子没有区别。这些新的计算结果表明需要进行实验验证。

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