Illinois Natural History Survey, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA.
Environ Toxicol Chem. 2013 Nov;32(11):2637-47. doi: 10.1002/etc.2355. Epub 2013 Sep 17.
The amphipod Hyalella azteca is commonly used as a model for determining safe concentrations of contaminants in freshwaters. The authors sequenced the mitochondrial cytochrome c oxidase subunit I (COI) gene for representatives of 38 populations of this species complex from US and Canadian toxicology research laboratories and eastern North American field sites to determine their genetic relationships. With 1 exception, all US and Canadian laboratory cultures sampled were identified as conspecific. In 22 wild populations spanning 5 US states and 1 Canadian province, the commonly occurring laboratory species was found only in northern Florida, USA. Therefore, the diversity of the H. azteca species complex detected in the wild is not accurately represented in North American laboratories, questioning the reliability of H. azteca cultures currently in use to accurately predict the responses of wild populations in ecotoxicological assays. The authors also examined the utility of different COI nucleotide fragments presently in use to determine phylogenetic relationships in this group and concluded that saturation in DNA sequences leads to inconsistent relationships between clades. Amino acid sequences for COI were not saturated and may allow a more accurate phylogeny estimate. Hyalella azteca is crucial for developing water-quality regulations; therefore, laboratories should know and standardize the strain(s) they use to confidently compare toxicity tests across laboratories and determine whether they are an appropriate surrogate for their regions.
水生无甲目摇蚊(Hyalella azteca)通常被用作确定淡水中污染物安全浓度的模型。作者对来自美国和加拿大毒理学研究实验室和北美东部野外地点的该物种复合体的 38 个种群的线粒体细胞色素 c 氧化酶亚基 I(COI)基因进行了测序,以确定它们的遗传关系。除了 1 个例外,所有被采样的美国和加拿大实验室培养物都被鉴定为同种。在跨越美国 5 个州和加拿大 1 个省的 22 个野生种群中,仅在美国佛罗里达州北部发现了常见的实验室物种。因此,在野外检测到的 H.azteca 物种复合体的多样性并没有准确地反映在北美实验室中,这质疑了目前用于生态毒理学测定中准确预测野生种群反应的 H.azteca 培养物的可靠性。作者还研究了目前用于确定该组系统发育关系的不同 COI 核苷酸片段的实用性,并得出结论,DNA 序列的饱和导致分支之间的关系不一致。COI 的氨基酸序列没有饱和,可能允许更准确的系统发育估计。水生无甲目摇蚊对制定水质法规至关重要;因此,实验室应该了解并标准化他们使用的菌株,以自信地比较实验室间的毒性测试,并确定它们是否是其地区的合适替代品。