• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

猕猴桃过敏原 Act d 11 的结构和生物信息学分析,该蛋白属于成熟相关蛋白家族。

Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins.

机构信息

Department of Chemistry and Biochemistry, University of South Carolina, 631 Sumter Street, Columbia, SC 29208, USA; Department of Molecular Physiology and Biological Physics, University of Virginia, 1340 Jefferson Park Avenue, Charlottesville, VA 22908, USA.

出版信息

Mol Immunol. 2013 Dec;56(4):794-803. doi: 10.1016/j.molimm.2013.07.004. Epub 2013 Aug 23.

DOI:10.1016/j.molimm.2013.07.004
PMID:23969108
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3783527/
Abstract

The allergen Act d 11, also known as kirola, is a 17 kDa protein expressed in large amounts in ripe green and yellow-fleshed kiwifruit. Ten percent of all kiwifruit-allergic individuals produce IgE specific for the protein. Using X-ray crystallography, we determined the first three-dimensional structures of Act d 11, produced from both recombinant expression in Escherichia coli and from the natural source (kiwifruit). While Act d 11 is immunologically correlated with the birch pollen allergen Bet v 1 and other members of the pathogenesis-related protein family 10 (PR-10), it has low sequence similarity to PR-10 proteins. By sequence Act d 11 appears instead to belong to the major latex/ripening-related (MLP/RRP) family, but analysis of the crystal structures shows that Act d 11 has a fold very similar to that of Bet v 1 and other PR-10 related allergens regardless of the low sequence identity. The structures of both the natural and recombinant protein include an unidentified ligand, which is relatively small (about 250 Da by mass spectrometry experiments) and most likely contains an aromatic ring. The ligand-binding cavity in Act d 11 is also significantly smaller than those in PR-10 proteins. The binding of the ligand, which we were not able to unambiguously identify, results in conformational changes in the protein that may have physiological and immunological implications. Interestingly, the residue corresponding to Glu45 in Bet v 1 (Glu46), which is important for IgE binding to the birch pollen allergen, is conserved in Act d 11, even though it is not in other allergens with significantly higher sequence identity to Bet v 1. We suggest that the so-called Gly-rich loop (or P-loop), which is conserved in all PR-10 allergens, may be responsible for IgE cross-reactivity between Bet v 1 and Act d 11.

摘要

过敏原 Act d 11,也称为 kirola,是一种在成熟的绿色和黄色果肉猕猴桃中大量表达的 17 kDa 蛋白。所有猕猴桃过敏个体中有 10%会产生针对该蛋白的特异性 IgE。我们使用 X 射线晶体学确定了 Act d 11 的前三个三维结构,这些结构分别来自大肠杆菌的重组表达和天然来源(猕猴桃)。虽然 Act d 11 在免疫学上与桦树花粉过敏原 Bet v 1 和其他与发病机制相关的蛋白家族 10(PR-10)成员相关,但它与 PR-10 蛋白的序列相似性较低。根据序列,Act d 11 似乎属于主要乳胶/成熟相关(MLP/RRP)家族,但晶体结构分析表明,无论序列同一性较低,Act d 11 的折叠都非常类似于 Bet v 1 和其他 PR-10 相关过敏原。天然和重组蛋白的结构都包括一个未被识别的配体,该配体相对较小(通过质谱实验约为 250 Da),很可能含有一个芳香环。Act d 11 的配体结合腔也明显小于 PR-10 蛋白。我们无法明确识别的配体结合导致蛋白构象发生变化,这可能具有生理和免疫学意义。有趣的是,Bet v 1 中与 IgE 结合重要的Glu45 对应残基(Glu46)在 Act d 11 中是保守的,尽管在与 Bet v 1 具有更高序列同一性的其他过敏原中不是这样。我们认为,所有 PR-10 过敏原中都保守的所谓 Gly-rich 环(或 P 环)可能是导致 Bet v 1 和 Act d 11 之间 IgE 交叉反应的原因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/2766dbc58273/nihms510096f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/07f4105e9866/nihms510096f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/2b7f4285326a/nihms510096f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/c31f07ad9613/nihms510096f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/ac1836f500c3/nihms510096f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/b37a529fa1ba/nihms510096f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/06767d77ab02/nihms510096f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/4e87ecaece83/nihms510096f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/2766dbc58273/nihms510096f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/07f4105e9866/nihms510096f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/2b7f4285326a/nihms510096f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/c31f07ad9613/nihms510096f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/ac1836f500c3/nihms510096f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/b37a529fa1ba/nihms510096f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/06767d77ab02/nihms510096f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/4e87ecaece83/nihms510096f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/50cb/3783527/2766dbc58273/nihms510096f8.jpg

相似文献

1
Structural and bioinformatic analysis of the kiwifruit allergen Act d 11, a member of the family of ripening-related proteins.猕猴桃过敏原 Act d 11 的结构和生物信息学分析,该蛋白属于成熟相关蛋白家族。
Mol Immunol. 2013 Dec;56(4):794-803. doi: 10.1016/j.molimm.2013.07.004. Epub 2013 Aug 23.
2
Kiwifruit Act d 11 is the first member of the ripening-related protein family identified as an allergen.猕猴桃 Act d 11 是首个被鉴定为过敏原的成熟相关蛋白家族成员。
Allergy. 2011 Jul;66(7):870-7. doi: 10.1111/j.1398-9995.2011.02555.x. Epub 2011 Feb 11.
3
Pollen-related food allergy: cloning and immunological analysis of isoforms and mutants of Mal d 1, the major apple allergen, and Bet v 1, the major birch pollen allergen.花粉相关食物过敏:主要苹果过敏原Mal d 1和主要桦树花粉过敏原Bet v 1的亚型及突变体的克隆与免疫分析
Eur J Nutr. 1999 Aug;38(4):201-15. doi: 10.1007/s003940050063.
4
Cysteine proteinase inhibitor Act d 4 is a functional allergen contributing to the clinical symptoms of kiwifruit allergy.半胱氨酸蛋白酶抑制剂 Act d 4 是一种功能性过敏原,与猕猴桃过敏的临床症状有关。
Mol Nutr Food Res. 2010 Mar;54(3):373-80. doi: 10.1002/mnfr.200900035.
5
Molecular cloning and characterization of a birch pollen minor allergen, Bet v 5, belonging to a family of isoflavone reductase-related proteins.一种桦树花粉次要过敏原Bet v 5的分子克隆与特性分析,该过敏原属于异黄酮还原酶相关蛋白家族。
J Allergy Clin Immunol. 1999 Nov;104(5):991-9. doi: 10.1016/s0091-6749(99)70080-1.
6
Chimeras of Bet v 1 and Api g 1 reveal heterogeneous IgE responses in patients with birch pollen allergy.桦树花粉过敏患者中,Bet v 1和Api g 1嵌合体显示出异质性IgE反应。
J Allergy Clin Immunol. 2014 Jul;134(1):188-94. doi: 10.1016/j.jaci.2013.12.1073. Epub 2014 Feb 12.
7
Utilizing the Banana S-Adenosyl-L-Homocysteine Hydrolase Allergen to Identify Cross-Reactive IgE in Ryegrass-, Latex-, and Kiwifruit-Allergic Individuals.利用香蕉 S-腺苷-L-高半胱氨酸水解酶过敏原鉴定黑麦草、乳胶和猕猴桃过敏个体中的交叉反应 IgE。
Int J Mol Sci. 2024 May 26;25(11):5800. doi: 10.3390/ijms25115800.
8
Characterization of Bet v 1-related allergens from kiwifruit relevant for patients with combined kiwifruit and birch pollen allergy.对与猕猴桃和桦树花粉联合过敏患者相关的猕猴桃中Bet v 1相关过敏原的特性分析。
Mol Nutr Food Res. 2008 Nov;52 Suppl 2:S230-40. doi: 10.1002/mnfr.200800146.
9
Enlarging the toolbox for allergen epitope definition with an allergen-type model protein.利用一种过敏原类型的模型蛋白扩展过敏原表位定义的工具库。
PLoS One. 2014 Oct 30;9(10):e111691. doi: 10.1371/journal.pone.0111691. eCollection 2014.
10
NMR resonance assignments of the PR-10 allergens Act c 8 and Act d 8 from golden and green kiwifruit.新西兰蛋白 8(Act c 8)和 Act d 8 的 PR-10 过敏原的核磁共振共振分配。
Biomol NMR Assign. 2021 Oct;15(2):367-371. doi: 10.1007/s12104-021-10031-w. Epub 2021 Jun 9.

引用本文的文献

1
Identification of potential molecular markers for detection of lengthy chilled storage of L. fruit.鉴定用于检测荔枝长时间冷藏的潜在分子标记物。
Heliyon. 2024 Dec 5;10(24):e40992. doi: 10.1016/j.heliyon.2024.e40992. eCollection 2024 Dec 30.
2
Identification of a 17 kDa protein that is a potentially novel antigen of lettuce-associated respiratory allergy in farmers.鉴定出一种 17kDa 蛋白,它可能是农民生菜相关呼吸道过敏的一种新型抗原。
Immun Inflamm Dis. 2023 Nov;11(11):e1093. doi: 10.1002/iid3.1093.
3
Structural Basis of the Immunological Cross-Reactivity between Kiwi and Birch Pollen.猕猴桃与桦树花粉免疫交叉反应性的结构基础
Foods. 2023 Oct 27;12(21):3939. doi: 10.3390/foods12213939.
4
Genome-Wide Evolutionary Characterization and Expression Analysis of Major Latex Protein (MLP) Family Genes in Tomato.番茄主要乳蛋白(MLP)家族基因的全基因组进化特征分析和表达分析。
Int J Mol Sci. 2023 Oct 9;24(19):15005. doi: 10.3390/ijms241915005.
5
Role of Small Molecule Ligands in IgE-Mediated Allergy.小分子配体在 IgE 介导的过敏反应中的作用。
Curr Allergy Asthma Rep. 2023 Sep;23(9):497-508. doi: 10.1007/s11882-023-01100-2. Epub 2023 Jun 23.
6
Genome-wide characterization of major latex protein gene family in peanut and expression analyses under drought and waterlogging stress.花生主要乳胶蛋白基因家族的全基因组特征分析及干旱和渍水胁迫下的表达分析
Front Plant Sci. 2023 Apr 18;14:1152824. doi: 10.3389/fpls.2023.1152824. eCollection 2023.
7
Functional Studies of Plant Latex as a Rich Source of Bioactive Compounds: Focus on Proteins and Alkaloids.植物乳胶作为生物活性化合物的丰富来源的功能研究:重点是蛋白质和生物碱。
Int J Mol Sci. 2021 Nov 17;22(22):12427. doi: 10.3390/ijms222212427.
8
Combined Protein and Alkaloid Research of Latex Reveals CmMLP1 Accompanied by Alkaloids with Cytotoxic Potential to Human Cervical Carcinoma Cells.乳胶的蛋白质和生物碱联合研究揭示了 CmMLP1 伴随着具有细胞毒性的生物碱,对人宫颈癌细胞有作用。
Int J Mol Sci. 2021 Oct 31;22(21):11838. doi: 10.3390/ijms222111838.
9
Allergens and their associated small molecule ligands-their dual role in sensitization.变应原及其相关的小分子配体——在致敏中的双重作用。
Allergy. 2021 Aug;76(8):2367-2382. doi: 10.1111/all.14861. Epub 2021 May 2.
10
Structural Characterization of Act c 10.0101 and Pun g 1.0101-Allergens from the Non-Specific Lipid Transfer Protein Family.非特异性脂质转移蛋白家族中 Act c 10.0101 和 Pun g 1.0101-过敏原的结构特征。
Molecules. 2021 Jan 6;26(2):256. doi: 10.3390/molecules26020256.

本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Agrobacterium-mediated transformation and regeneration of kiwi fruit.农杆菌介导的猕猴桃遗传转化和再生。
Plant Cell Rep. 1991 Sep;10(6-7):286-90. doi: 10.1007/BF00193143.
3
Solution structure of the strawberry allergen Fra a 1.草莓过敏原 Fra a 1 的溶液结构。
Biosci Rep. 2012 Dec;32(6):567-75. doi: 10.1042/BSR20120058.
4
Crystallographically mapped ligand binding differs in high and low IgE binding isoforms of birch pollen allergen bet v 1.结晶映射配体结合在桦树花粉过敏原 bet v 1 的高和低 IgE 结合异构体中存在差异。
J Mol Biol. 2012 Sep 7;422(1):109-23. doi: 10.1016/j.jmb.2012.05.016. Epub 2012 May 23.
5
The fruit ripening-related gene FaAAT2 encodes an acyl transferase involved in strawberry aroma biogenesis.与果实成熟相关的基因 FaAAT2 编码了一种酰基转移酶,该酶参与草莓香气的生物合成。
J Exp Bot. 2012 Jun;63(11):4275-90. doi: 10.1093/jxb/ers120. Epub 2012 May 4.
6
REFMAC5 for the refinement of macromolecular crystal structures.用于大分子晶体结构精修的REFMAC5
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67. doi: 10.1107/S0907444911001314. Epub 2011 Mar 18.
7
Overview of the CCP4 suite and current developments.CCP4软件包概述及当前进展
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):235-42. doi: 10.1107/S0907444910045749. Epub 2011 Mar 18.
8
Kiwifruit Act d 11 is the first member of the ripening-related protein family identified as an allergen.猕猴桃 Act d 11 是首个被鉴定为过敏原的成熟相关蛋白家族成员。
Allergy. 2011 Jul;66(7):870-7. doi: 10.1111/j.1398-9995.2011.02555.x. Epub 2011 Feb 11.
9
To automate or not to automate: this is the question.是否自动化:这就是问题所在。
J Struct Funct Genomics. 2010 Sep;11(3):211-21. doi: 10.1007/s10969-010-9092-9. Epub 2010 Jun 6.
10
Towards the comprehensive, rapid, and accurate prediction of the favorable tautomeric states of drug-like molecules in aqueous solution.朝向在水溶液中对类药性分子的有利互变异构态的全面、快速和准确预测。
J Comput Aided Mol Des. 2010 Jun;24(6-7):591-604. doi: 10.1007/s10822-010-9349-1. Epub 2010 Mar 31.