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新型藻蓝素甲醚衍生物配合物结构的理论研究:富含铁的应激环境中的潜在生物标志物。

Theoretical study of novel complexed structures for methoxy derivatives of scytonemin: potential biomarkers in iron-rich stressed environments.

机构信息

1 Department of Chemistry, Bogazici University , Istanbul, Turkey .

出版信息

Astrobiology. 2013 Sep;13(9):861-9. doi: 10.1089/ast.2013.0980. Epub 2013 Aug 30.

DOI:10.1089/ast.2013.0980
PMID:23992252
Abstract

Scytonemin is a cyanobacterial sheath pigment with potent UV (UVA, UVB, and UVC) absorbing properties. Di- and tetramethoxy derivatives of scytonemin have also been found and described in the literature. The importance of these biomolecules is their photoprotective function, which is one of the major survival strategies adopted by extremophiles in environmentally stressed conditions. Also, iron compounds [particularly iron(III) oxides] offer an additional UV-protecting facility to subsurface endolithic biological colonization; hence, banded iron formations (accompanied by zones of depletion of iron) in rock matrices have attracted attention with special interest in the method of transportation of iron compounds through the rock. Di- and tetramethoxyscytonemin and their iron(III) complexes have been modeled and studied computationally by using density functional theory calculations at the level of B3LYP/6-31G** methodology. We propose new structures that could feature in survival strategy and facilitate the movement of iron through the rock especially for iron-rich stressed terrestrial environments exemplified by the Río Tinto system with the added potential of subsurface Mars exploration. This study represents a continuation of our previous work on scytonemin. The calculated Raman spectra of the proposed iron complexes are compared with those of their parent compounds and discussed in relation to structural changes effected in the parent ligand upon complexation. This information leads to new insights to be gained by experimental Raman spectroscopists and the characterization of spectroscopic biosignatures for the database being compiled for the remote Raman analytical interrogation of the martian surface and subsurface being proposed for the ESA ExoMars mission planned for launch in 2018.

摘要

藻青素是一种蓝细菌鞘色素,具有很强的紫外线(UVA、UVB 和 UVC)吸收特性。在文献中也发现并描述了藻青素的二甲基和四甲氧基衍生物。这些生物分子的重要性在于它们的光保护功能,这是极端微生物在环境压力条件下采用的主要生存策略之一。此外,铁化合物(特别是三价氧化铁)为地下内共生生物的殖民提供了额外的紫外线保护设施;因此,岩石基质中的条带状铁建造(伴随着铁的消耗带)引起了人们的关注,特别是对铁化合物通过岩石运输的方法特别感兴趣。通过使用密度泛函理论计算,在 B3LYP/6-31G**方法学水平上对二甲基和四甲氧基藻青素及其三价铁配合物进行了建模和计算研究。我们提出了新的结构,这些结构可能具有生存策略的特征,并促进铁在岩石中的运动,特别是在富含铁的陆地紧张环境中,例如里托河系统,同时具有地下火星探测的附加潜力。这项研究是我们以前关于藻青素工作的延续。所提出的铁配合物的计算拉曼光谱与它们的母体化合物的拉曼光谱进行了比较,并就母体配体在配位时结构变化进行了讨论。这些信息为实验拉曼光谱学家提供了新的见解,并为正在为 ESA ExoMars 任务编制的数据库中对火星表面和地下的远程拉曼分析进行了特征描述,该任务计划于 2018 年发射。

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引用本文的文献

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Biotechnological Production of the Sunscreen Pigment Scytonemin in Cyanobacteria: Progress and Strategy.蓝细菌中防晒色素scytonemin的生物技术生产:进展与策略
Mar Drugs. 2021 Feb 27;19(3):129. doi: 10.3390/md19030129.
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Scytonin, a novel cyanobacterial photoprotective pigment: calculations of Raman spectroscopic biosignatures.集胞藻蓝蛋白,一种新型蓝藻光保护色素:拉曼光谱生物特征的计算
J Mol Model. 2014 Mar;20(3):2157. doi: 10.1007/s00894-014-2157-0. Epub 2014 Feb 25.