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蛋白酶体介导的 Def1 加工,是细胞对应转录应激的关键步骤。

Proteasome-mediated processing of Def1, a critical step in the cellular response to transcription stress.

机构信息

Mechanisms of Transcription Laboratory, Clare Hall Laboratories, Cancer Research UK London Research Institute, South Mimms EN6 3LD, UK.

Molecular Biology Programme, Memorial Sloan-Kettering Cancer Center, York Avenue 1275, New York, NY 10021, USA.

出版信息

Cell. 2013 Aug 29;154(5):983-995. doi: 10.1016/j.cell.2013.07.028.

DOI:10.1016/j.cell.2013.07.028
PMID:23993092
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3778974/
Abstract

DNA damage triggers polyubiquitylation and degradation of the largest subunit of RNA polymerase II (RNAPII), a "mechanism of last resort" employed during transcription stress. In yeast, this process is dependent on Def1 through a previously unresolved mechanism. Here, we report that Def1 becomes activated through ubiquitylation- and proteasome-dependent processing. Def1 processing results in the removal of a domain promoting cytoplasmic localization, resulting in nuclear accumulation of the clipped protein. Nuclear Def1 then binds RNAPII, utilizing a ubiquitin-binding domain to recruit the Elongin-Cullin E3 ligase complex via a ubiquitin-homology domain in the Ela1 protein. This facilitates polyubiquitylation of Rpb1, triggering its proteasome-mediated degradation. Together, these results outline the multistep mechanism of Rpb1 polyubiquitylation triggered by transcription stress and uncover the key role played by Def1 as a facilitator of Elongin-Cullin ubiquitin ligase function.

摘要

DNA 损伤会引发 RNA 聚合酶 II(RNAPII)大亚基的多泛素化和降解,这是转录应激过程中采用的“最后的手段”机制。在酵母中,该过程依赖于以前未解决机制的 Def1。在这里,我们报告说,Def1 通过泛素化和蛋白酶体依赖性加工而被激活。Def1 的加工导致促进细胞质定位的结构域被去除,从而导致被截断的蛋白质在核内积累。核内的 Def1 然后与 RNAPII 结合,利用泛素结合结构域通过 Ela1 蛋白中的泛素同源结构域招募 Elongin-Cullin E3 连接酶复合物。这促进了 Rpb1 的多泛素化,触发其蛋白酶体介导的降解。总之,这些结果概述了由转录应激引发的 Rpb1 多泛素化的多步机制,并揭示了 Def1 作为 Elongin-Cullin 泛素连接酶功能促进因子的关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/fc9bb36242d7/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/5c971857fe79/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/19d8cd433729/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/0504b75995ea/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/0cc698230a91/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/0d26bc888745/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/79d0e2522693/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/b36887ae0986/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/fc9bb36242d7/gr7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/5c971857fe79/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/19d8cd433729/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/0504b75995ea/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/0cc698230a91/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/0d26bc888745/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/79d0e2522693/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/b36887ae0986/gr6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1730/3778974/fc9bb36242d7/gr7.jpg

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1
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2
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PLoS One. 2012;7(10):e46398. doi: 10.1371/journal.pone.0046398. Epub 2012 Oct 3.
3
Transcription coupled repair at the interface between transcription elongation and mRNP biogenesis.
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Nucleic Acids Res. 2025 Feb 8;53(4). doi: 10.1093/nar/gkaf109.
4
VPS28 regulates triglyceride synthesis via ubiquitination in bovine mammary epithelial cells.VPS28通过泛素化作用调控奶牛乳腺上皮细胞中的甘油三酯合成。
Sci Rep. 2024 Dec 28;14(1):31310. doi: 10.1038/s41598-024-82774-0.
5
Characterization of BioID tagging systems in budding yeast and exploring the interactome of the Ccr4-Not complex.酵母中 BioID 标记系统的特征分析及 Ccr4-Not 复合物互作组的探索。
G3 (Bethesda). 2024 Nov 6;14(11). doi: 10.1093/g3journal/jkae221.
6
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Nat Commun. 2024 May 15;15(1):4128. doi: 10.1038/s41467-024-48530-8.
7
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8
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4
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5
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Biochim Biophys Acta. 2013 Jan;1829(1):151-7. doi: 10.1016/j.bbagrm.2012.08.002. Epub 2012 Aug 31.
6
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9
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