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虹鳟 5-羟基异尿嘧啶水解酶/转甲状腺素蛋白超家族的特性:进化和功能分析。

Characterization of Oncorhynchus mykiss 5-hydroxyisourate hydrolase/transthyretin superfamily: evolutionary and functional analyses.

机构信息

Department of Biological Science, Graduate School of Science, Shizuoka University, Shizuoka 422-8529, Japan.

出版信息

Gene. 2013 Dec 1;531(2):326-36. doi: 10.1016/j.gene.2013.08.071. Epub 2013 Aug 30.

Abstract

Teleosts have highly diverged genomes that resulted from whole genome duplication, which leads to an extensive diversity of paralogous genes. Transthyretin (TTR), an extracellular thyroid hormone (TH) binding protein, is thought to have evolved from an ancestral 5-hydroxyisourate hydrolase (HIUHase) by gene duplication at some stage of chordate evolution. To characterize the functions of proteins that arose from duplicated genes in teleosts, we investigated the phylogenetic relationship of teleost HIUHase and TTR aa sequences, the expression levels of Oncorhynchus mykiss HIUHase and TTR mRNA in various tissues and the biological activities of the O. mykiss re-HIUHase and re-TTR. Phylogenetic analysis of the teleost aa sequences revealed the presence of two HIUHase subfamilies, HIUHase 1 (which has an N-terminal peroxisomal targeting signal-2 [PTS2]) and HIUHase 2 (which does not have an N-terminal PTS2), and one TTR family. The tissue distributions of HIUHase 1 and TTR mRNA were similar in juvenile O. mykiss and the mRNA levels were highest in the liver. The O. mykiss re-HIUHase and re-TTR proteins were both 40-50 kDa homotetramers consisting of 14-15 kDa subunits, with 30% identity. HIUHase had 5-hydroxyisourate (5-HIU) hydrolysis activity with Zn(2+) sensitivity, whereas TTR had ligand binding activity with a preference for THs and several environmental chemicals, such as halogenated phenols. Our results suggest that O. mykiss HIUHase and TTR have diverged from a common ancestral HIHUase with no functional complementation.

摘要

硬骨鱼类的基因组高度分化,这是由于全基因组复制导致的,从而产生了大量的基因家族。甲状腺素(TH)结合蛋白转甲状腺素蛋白(TTR)被认为是从脊索动物进化过程中的某个阶段的祖先 5-羟基异尿酸水解酶(HIUHase)通过基因复制进化而来的。为了研究鱼类中从复制基因中产生的蛋白质的功能,我们研究了鱼类 HIUHase 和 TTR aa 序列的系统发育关系、虹鳟鱼各组织中 HIUHase 和 TTR mRNA 的表达水平以及虹鳟鱼再 HIUHase 和再 TTR 的生物学活性。硬骨鱼类 aa 序列的系统发育分析表明,存在两种 HIUHase 亚家族,HIUHase 1(具有 N 端过氧化物酶体靶向信号-2 [PTS2])和 HIUHase 2(没有 N 端 PTS2),以及一个 TTR 家族。在幼体虹鳟鱼中,HIUHase 1 和 TTR mRNA 的组织分布相似,且在肝脏中的 mRNA 水平最高。虹鳟鱼再 HIUHase 和再 TTR 蛋白均为 40-50 kDa 四聚体,由 14-15 kDa 的亚基组成,具有 30%的同源性。HIUHase 具有 5-羟基异尿酸(5-HIU)水解活性,对 Zn(2+) 敏感,而 TTR 具有配体结合活性,对 TH 和几种环境化学物质(如卤代酚)具有偏好性。我们的结果表明,虹鳟鱼 HIUHase 和 TTR 是从一个共同的祖先 HIHUase 分化而来的,没有功能上的互补。

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