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鉴定赋予拟南芥脂肪醇形成还原酶 FAR5 和 FAR8 对链长底物特异性的氨基酸。

Identification of amino acids conferring chain length substrate specificities on fatty alcohol-forming reductases FAR5 and FAR8 from Arabidopsis thaliana.

机构信息

From the Institute of Biochemistry, Department of Biology, Carleton University, Ottawa, Ontario K1S 5B6, Canada and.

the Laboratoire de Biogenèse Membranaire, Université Bordeaux Ségalen, CNRS-UMR 5200, Bâtiment A3-INRA Bordeaux Aquitaine BP81, 71 Avenue Edouard Bourlaux, 33883 Villenave D'Ornon Cedex, France.

出版信息

J Biol Chem. 2013 Oct 18;288(42):30345-30355. doi: 10.1074/jbc.M113.499715. Epub 2013 Sep 4.

Abstract

Fatty alcohols play a variety of biological roles in all kingdoms of life. Fatty acyl reductase (FAR) enzymes catalyze the reduction of fatty acyl-coenzyme A (CoA) or fatty acyl-acyl carrier protein substrates to primary fatty alcohols. FAR enzymes have distinct substrate specificities with regard to chain length and degree of saturation. FAR5 (At3g44550) and FAR8 (At3g44560) from Arabidopsis thaliana are 85% identical at the amino acid level and are of equal length, but they possess distinct specificities for 18:0 or 16:0 acyl chain length, respectively. We used Saccharomyces cerevisiae as a heterologous expression system to assess FAR substrate specificity determinants. We identified individual amino acids that affect protein levels or 16:0-CoA versus 18:0-CoA specificity by expressing in yeast FAR5 and FAR8 domain-swap chimeras and site-specific mutants. We found that a threonine at position 347 and a serine at position 363 were important for high FAR5 and FAR8 protein accumulation in yeast and thus are likely important for protein folding and stability. Amino acids at positions 355 and 377 were important for dictating 16:0-CoA versus 18:0-CoA chain length specificity. Simultaneously converting alanine 355 and valine 377 of FAR5 to the corresponding FAR8 residues, leucine and methionine, respectively, almost fully converted FAR5 specificity from 18:0-CoA to 16:0-CoA. The reciprocal amino acid conversions, L355A and M377V, made in the active FAR8-S363P mutant background converted its specificity from 16:0-CoA to 18:0-CoA. This study is an important advancement in the engineering of highly active FAR proteins with desired specificities for the production of fatty alcohols with industrial value.

摘要

脂肪醇在所有生命领域中发挥着多种生物学作用。脂肪酰基辅酶 A(CoA)或脂肪酰-酰基载体蛋白的还原酶(FAR)酶催化脂肪酸-CoA 或脂肪酸-酰基载体蛋白底物还原为初级脂肪醇。FAR 酶对链长和饱和度具有明显的底物特异性。拟南芥中的 FAR5(At3g44550)和 FAR8(At3g44560)在氨基酸水平上具有 85%的同源性,且长度相等,但它们对 18:0 或 16:0 酰基链长具有不同的特异性。我们使用酿酒酵母作为异源表达系统来评估 FAR 底物特异性决定因素。我们通过在酵母中表达 FAR5 和 FAR8 结构域交换嵌合体和定点突变体,确定了影响蛋白质水平或 16:0-CoA 与 18:0-CoA 特异性的单个氨基酸。我们发现位置 347 的苏氨酸和位置 363 的丝氨酸对于 FAR5 和 FAR8 在酵母中的高蛋白积累很重要,因此可能对蛋白质折叠和稳定性很重要。位置 355 和 377 的氨基酸对于决定 16:0-CoA 与 18:0-CoA 链长特异性很重要。同时将 FAR5 的丙氨酸 355 和缬氨酸 377 转换为 FAR8 的相应残基亮氨酸和甲硫氨酸,几乎完全将 FAR5 的特异性从 18:0-CoA 转换为 16:0-CoA。在活性 FAR8-S363P 突变体背景下进行的反向氨基酸转换 L355A 和 M377V 将其特异性从 16:0-CoA 转换为 18:0-CoA。这项研究是在工程设计具有工业价值的高活性 FAR 蛋白方面的重要进展,这些 FAR 蛋白具有所需的特异性。

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