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使用非天然氨基酸对氰基苯丙氨酸作为灵敏的光学探针来研究蛋白质折叠和聚集。

Study protein folding and aggregation using nonnatural amino acid p-cyanophenylalanine as a sensitive optical probe.

作者信息

Du Deguo, Liu Haiyang, Ojha Bimlesh

机构信息

Department of Chemistry and Biochemistry, Florida Atlantic University, Boca Raton, FL, USA.

出版信息

Methods Mol Biol. 2013;1081:77-89. doi: 10.1007/978-1-62703-652-8_6.

DOI:10.1007/978-1-62703-652-8_6
PMID:24014435
Abstract

Incorporation of nonnatural amino acids with a variety of special side groups into protein sequences has substantially expanded the experimental means of exploring protein structures and functions. Recently, p-cyanophenylalanine (PheCN), the nitrile analogue of phenylalanine, has been used as a novel optical probe for protein binding and folding studies. The fluorescence emission of PheCN is sensitive to solvent and local environment of the residue, making it a useful fluorescent probe of protein structural change at residue-specific resolution. Moreover, the utility of PheCN is increased by its ability to excite tryptophan fluorescence via the mechanism of fluorescence resonance energy transfer. PheCN could be applied to study a variety of biological problems, e.g., protein folding/unfolding and protein aggregation.

摘要

将带有各种特殊侧链基团的非天然氨基酸掺入蛋白质序列中,极大地扩展了探索蛋白质结构和功能的实验手段。最近,对氰基苯丙氨酸(PheCN),苯丙氨酸的腈类似物,已被用作蛋白质结合和折叠研究的新型光学探针。PheCN的荧光发射对残基的溶剂和局部环境敏感,使其成为在残基特异性分辨率下蛋白质结构变化的有用荧光探针。此外,PheCN通过荧光共振能量转移机制激发色氨酸荧光的能力增加了其效用。PheCN可用于研究各种生物学问题,例如蛋白质折叠/去折叠和蛋白质聚集。

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引用本文的文献

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Sensing pH via p-cyanophenylalanine fluorescence: Application to determine peptide pKa and membrane penetration kinetics.通过对氰基苯丙氨酸荧光传感pH值:用于测定肽的pKa和膜渗透动力学
Anal Biochem. 2015 Aug 15;483:21-6. doi: 10.1016/j.ab.2015.04.026. Epub 2015 Apr 29.