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α-甲基反式环丙烷基团而非顺式环丙烷单元促进分枝杆菌甲氧基和酮基类脂酸的构象折叠。

Conformational folding of mycobacterial methoxy- and ketomycolic acids facilitated by α-methyl trans-cyclopropane groups rather than cis-cyclopropane units.

机构信息

Division of Material Science, Graduate School of Science and Engineering, Saitama University, 255 Shimo-Okubo, Sakura-ku, Saitama 338-8570, Japan.

School of Pharmacy, Tokyo University of Pharmacy and Life Sciences, 1432-1 Horinouchi, Hachioji, Tokyo 192-0392, Japan.

出版信息

Microbiology (Reading). 2013 Nov;159(Pt 11):2405-2415. doi: 10.1099/mic.0.068866-0. Epub 2013 Sep 6.

Abstract

The oxygenated long-chain mycolic acids from many mycobacteria are characterized by the presence of mid-chain cyclopropane groups, which can have either cis-configuration or trans-configuration with an adjacent methyl branch. To determine the effect of these functional groups on mycolic acid conformation, surface pressure (π) versus mean molecular area isotherms of methoxy- (MeO-) mycolic acids (MAs) from Mycobacterium kansasii, Mycobacterium tuberculosis (Mtb) Canetti and Mtb H37Ra, and of keto-MAs from Mycobacterium avium-intracellulare complex (MAC) and Mtb H37Ra were recorded and analysed. The MeO- and keto-MAs from Mtb H37Ra, containing scarcely any trans-cyclopropyl groups, apparently took no fully folded 'W-form' conformations. Keto-MA from MAC, whose trans-cyclopropyl group content is nearly 90 %, showed a very solid W-form conformation. MeO-MAs from M. kansasii and Mtb Canetti gave stable W-form conformations at lower temperatures and surface pressures and extended conformations at higher temperatures and surface pressures; their W-form conformation was not as stable as expected from their cis-cyclopropyl group content, probably because they had a wide range of constituent homologues. Energy level calculations of cis- or α-methyl trans-cyclopropane-containing model molecules and computer simulation studies confirmed the superior folding properties of the latter functional unit. The present results were compared with those of MeO- and keto-MAs from Mtb and from M. bovis Bacillus Calmette-Guérin (BCG) reported previously. Among the oxygenated MAs, those having higher trans-cyclopropane content tended to take W-form conformations more firmly, implying that the meromycolate proximal intra-chain α-methyl trans-cyclopropane groups facilitated MA folding more than cis-cyclopropane groups.

摘要

许多分枝杆菌的含氧长链分枝菌酸的特征是存在中链环丙烷基团,这些基团可以具有顺式构型或反式构型,并且与相邻的甲基支链相邻。为了确定这些官能团对分枝菌酸构象的影响,记录并分析了堪萨斯分枝杆菌、结核分枝杆菌(Mtb)Canetti 和 Mtb H37Ra 的甲氧基-(MeO-)分枝菌酸(MA)和禽分枝杆菌-细胞内分枝杆菌复合体(MAC)和 Mtb H37Ra 的酮-MA 的表面压力(π)与平均分子面积等温线。Mtb H37Ra 中的 MeO-和酮-MA 几乎不含反式环丙基基团,显然没有采取完全折叠的“W 形”构象。MAC 的酮-MA 其反式环丙基基团含量接近 90%,显示出非常坚固的 W 形构象。M. kansasii 和 Mtb Canetti 的 MeO-MA 在较低的温度和表面压力下给出稳定的 W 形构象,在较高的温度和表面压力下给出扩展的构象;它们的 W 形构象的稳定性不如预期的顺式环丙基基团含量,可能是因为它们有广泛的组成同系物。顺式或α-甲基反式环丙烷含模型分子的能级计算和计算机模拟研究证实了后者功能单元的优越折叠性能。本研究结果与先前报道的来自 Mtb 和牛分枝杆菌卡介苗(BCG)的 MeO-和酮-MA 的结果进行了比较。在含氧 MA 中,具有较高反式环丙基含量的 MA 更容易形成 W 形构象,这表明在链内亚甲基反式环丙烷基团促进 MA 折叠方面比顺式环丙基基团更有效。

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