Department of Macromolecular Science, Graduate School of Science, Osaka University , Toyonaka, Osaka 560-0043, Japan.
Inorg Chem. 2013 Oct 7;52(19):10812-24. doi: 10.1021/ic400671v. Epub 2013 Sep 11.
A series of magnesium carboxylate complexes containing intramolecular NH···O hydrogen bonds were synthesized. Their molecular structures were determined by X-ray analysis. A direct NH···O hydrogen bond to the coordinated oxygen atom elongated the Mg-O bond, while a hydrogen bond to the carbonyl group shortened the Mg-O bond. Double NH···O hydrogen bonds significantly lowered the basicity of the carboxylate anion and prevented coordination to the Mg ion in a trans configuration; however, a cis-dicarboxylate complex was successfully obtained. Strong coordination of water to the Mg(2+) ion stabilizes the weak Mg-carboxylate bond at the trans position. In contrast, a weak Mg-carboxylate bond strengthens the Mg-O(water) bond, probably increasing the acidity. Based on the experimental results and theoretical calculations, a new switching mechanism is proposed. In the proposed mechanism, the acidity of the coordinated water on magnesium is controlled during catalytic hydrolysis in endonuclease.
合成了一系列含有分子内 NH···O 氢键的镁羧酸盐配合物。通过 X 射线分析确定了它们的分子结构。一个直接的 NH···O 氢键与配位氧原子相连,使 Mg-O 键伸长,而氢键与羰基相连则使 Mg-O 键缩短。双 NH···O 氢键显著降低了羧酸盐阴离子的碱性,并阻止了顺式构型的 Mg 离子配位;然而,成功地获得了顺式-二羧酸盐配合物。水与 Mg(2+)离子的强配位稳定了处于反式位置的弱 Mg-羧酸盐键。相比之下,弱的 Mg-羧酸盐键增强了 Mg-O(水)键,可能增加了酸性。基于实验结果和理论计算,提出了一种新的开关机制。在提出的机制中,在核酸内切酶的催化水解过程中,控制了镁上配位水的酸性。